| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1198 |
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| Symbol | |
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| ID | 4172604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1444668 |
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| End bp | 1445624 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638054205 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_660778 |
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| Protein GI | 109897523 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGATTT CTTTTATCAT TCCTCACAAA GGAAGGTTTG AAATGTTAAT TCAAACCATT
GAATCTATTG CTAAACAAAC CTTTGACTTA TCTCAAGTAG AAGTCATCGT CGTCAGTCAA
ACAAAAGAGG CGCTAAGCCA CACCTTTTGT AACGACCATT CATTGCGTAT CAACACATTT
TTACGTTCTG AGTCAGACAC CATATCGGCC CTTAGAAATT ACGGCGAGAC TCAAGCACAC
GGAGAGTTTT TAGCGTTTCT TGATGCGGAT ATCTACTTGT CAGAAAACTG GCTTGAGCAA
ATGTTGAACA CCTTAGATTG CGATCCAACT CGAATTATTG CCAGTGCTAT GCAAATTTGT
CTACCAGAGG CTCCGCCGCT AGAGAAAATT CGCACGAGTT TGAGCAACGC AGAATTGGAC
ACCAACGTGG CGTTTTTACC CGGTAGAAAT TTATTTCTCA CCCGAAACGC ATTTCACAAA
ATTGGGGGGT TTCCAGAACA CCTGCTGACC TGCGAAGATT ACTATTTTAC TGACAAAGCA
GCGCAATTAG GCGCCCTGTT TTATACCTCA GCAGCTAATT ACATTCATTT AGGTGAAGAT
AAAACCTTAA AAGGTATGTT TGACAAGGAG ATATGGCGCG GGCAGTCAAA TTTAAAGTCT
ATTGAAGGTA GACACATCCC TATTAGGGAA TGGCCAAGCT TTATTGTTCC CCCAGCGATT
TTTTTATGCA TTCTGTGTGC GCTTATTCTA ATATGCGCCG GGCAAATGGC CCTAGCCTTG
CTTAGTTCGA TACTAGCCCT GATACCTTTA CTTGCATACA CCATACGTTT ATATCGCTTA
GATACATTGA AGGTCTCTTT TGTAAACACA TTCACCTTCT ATGCGGTGTA CTTTCCAGCT
CGGGCGATCG GTACCTTTGC CGGCATATTT AAATCTATTA GCAATAAAAA CCCTTAA
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| Protein sequence | MQISFIIPHK GRFEMLIQTI ESIAKQTFDL SQVEVIVVSQ TKEALSHTFC NDHSLRINTF
LRSESDTISA LRNYGETQAH GEFLAFLDAD IYLSENWLEQ MLNTLDCDPT RIIASAMQIC
LPEAPPLEKI RTSLSNAELD TNVAFLPGRN LFLTRNAFHK IGGFPEHLLT CEDYYFTDKA
AQLGALFYTS AANYIHLGED KTLKGMFDKE IWRGQSNLKS IEGRHIPIRE WPSFIVPPAI
FLCILCALIL ICAGQMALAL LSSILALIPL LAYTIRLYRL DTLKVSFVNT FTFYAVYFPA
RAIGTFAGIF KSISNKNP
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