| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1185 |
|---|
| Symbol | |
|---|
| ID | 4172591 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 1427974 |
|---|
| End bp | 1429032 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638054192 |
|---|
| Product | acyltransferase 3 |
|---|
| Protein accession | YP_660765 |
|---|
| Protein GI | 109897510 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1835] Predicted acyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGGGG CATACAGGAC AGTATTAGCA TTGATGGTCG TTTTTTATCA TATTGGCGGC
ATTCCTCATA TTGGCTCGTA CGCTGTATTC GGGTTTTATG CACTTAGCGG TTACTTGATG
ACATTTGTGA TTCAGGAGAC CTATGGTTAC ACGGCAACTG GGTTGAAAAA GTATACATTC
AATCGGTTTT TACGTATCTA CCCTATGTAT TGGGCTTCCA TTATATTCTC CATAATATTG
ATTATGTTAG TTGGCGAACA AAATTCATTC GAATACCATA AGGCACTGTT TCTACCAGAT
AATCTAATCG ACTCCTTAAA AAACTTATTT CTATTTTTTC CATTCAGAGA AACACCTAGG
CTAACTCCTC CAGCGTGGGC CCTTACGGTA GAGGTTTTTT ATTATATTTT AATAGGTGTA
GGAATTTCGA AATATAAAAA GGTAGTGATT TTCTGGTTCG TATTAAGTGT TATTTATCAT
GTTGCCGTAG GAGTTTTTCA ATTCGGCTTT GAACATCGCT ACTACACCAT ACCGGCCGCG
TCACTTCCTT TTTCAGTGGG AGCACTCATA TTTCATTACA GAGAGTCGCT GCAAACGAGC
ATGAATAGCA ACCGGCTGAC CAAGCATTCC TATTTTCCCT ATTTTTTAGG AACGGCTATC
TTGTTCAACT GGTATTTAGG CAGACAAGTG AAACAAGAAT TGTTTGACTT AGACAGCTTA
TTTTTTTACG TCAATTTTGG ACTTTGTGTC ATAATGATCG TCGTTTTAAA AGAAAAAAAA
TCACTGCCAT TTATAAGTAA GAAAGTGGAT AACTGGTTAG GTAATTTTAG CTATCCCATT
TATCTTATCC ATTATCAAGT TGCATTTGTC GTACTCATTA TTATGGAGTT TATGGGTAAG
CAATATACTC GACCAAACTT TACTCTCATG CTAGTAAGCC TTCCGTTTTT ATTTTTGTTT
TCTTGGGTGT TAATATTTGT ACTTGAAAGA CCCATAGAAC ACATGCGCCA AAAGATTAAA
AAAAAGAAAA GTCGACCCTG CACTCTCAGT AACAAGTAA
|
|---|
| Protein sequence | MFGAYRTVLA LMVVFYHIGG IPHIGSYAVF GFYALSGYLM TFVIQETYGY TATGLKKYTF
NRFLRIYPMY WASIIFSIIL IMLVGEQNSF EYHKALFLPD NLIDSLKNLF LFFPFRETPR
LTPPAWALTV EVFYYILIGV GISKYKKVVI FWFVLSVIYH VAVGVFQFGF EHRYYTIPAA
SLPFSVGALI FHYRESLQTS MNSNRLTKHS YFPYFLGTAI LFNWYLGRQV KQELFDLDSL
FFYVNFGLCV IMIVVLKEKK SLPFISKKVD NWLGNFSYPI YLIHYQVAFV VLIIMEFMGK
QYTRPNFTLM LVSLPFLFLF SWVLIFVLER PIEHMRQKIK KKKSRPCTLS NK
|
|---|
| |