| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1173 |
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| Symbol | |
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| ID | 4172579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1414690 |
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| End bp | 1416183 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638054180 |
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| Product | eight transmembrane protein EpsH |
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| Protein accession | YP_660753 |
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| Protein GI | 109897498 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02602] eight transmembrane protein EpsH (proposed exosortase)
[TIGR02914] EpsI family protein
[TIGR03109] exosortase 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATGATG GAAGTATGCG TGCCCCTGAA GAACGTCATT CAGTAATAGG GATTATTGCG
CTGCTAATTG TTGTCGCGTT TTGGGTGGTT ACATTTTGGC AGGGGCTTGT CTCCGCAATT
GATATTTGGA TTATTTCCGA TATTTTTAAT CACTGTTTAT TTGTTATTCC TGCCAGCATT
TATTTTATTT ATTGTAAAAA AGAGCAACTC TCGCTCTCAG CCATTAGACC AAATTACTGG
GTTTTAATTT TATGCTTTGG TAGCTTAGGG CTATATGGGG TTGGGCTCTC AGGTGGTGTT
CAGCTTTTCA TGCATATTGC TACATTTACC TTCTTACCCT TTAGCATTTG GTTTCTATTA
GGAAACGAGC AAGCTAAAAG AATCTTATTT CCTTTATTCT TTATCGTCTT TTGTATTCCG
GTAGGCGAGG AGTTAATTCC TACGCTGCAA GCTGTTACCG CAGACTTATC TGTCATGATG
TTACAGTGGG TCAATGTGCC AATCTATCGA AGTGGCTTAT ACATAGAGAT CCCTGAGGGC
CGGTTTCTTG TGGCAGAAGC ATGTTCAGGT ATTAGCTTTT TCATCGCATC GGTCGTGATT
GGTTCGTTGT ATGCCTATAT GAATATGCAG TCGAGTGTTC GTAGATTTTC GTTCGTGTGT
ATATCCATTT TGTTCCCTAT TATAGCCAAT GCTATAAGGG TGTTTGGCAT CATTTTGACT
GGCCATCTAA CGAACATGGA GCATGCTGTC GGTGCGGATC ACCTTATCTA TGGATGGGTG
TTTTTTAGTT TAGTAATCAT ATGCCTAATA GGGCTGGGCG AGTTAATAAG AGAAAAGTCT
TCTGATCTAA AACCAGAAAC ACCACTTGCA ATCCCTTTCG TATCCTCTAA TCAAGTTTAT
ATAAAGGCAA GTGTGACAAT ATCGGTTTCT ATGTTGTTTT TCTTATTCTG GTACCAACTT
ATCCAAAGCC AATTAGTAGC AGGAACCTCA CCTGAGCGTC TCAAAGCATT GCCTTTTACA
AGTGCACAAG TAACTGCTAA CTGGTCGCCT GAGTTTGTCG ATTTTTATGA CAAAAATACT
TCTCGATTTG CGTTCGAAAA CAAAGCGGTT GACATGTATG CGGTTTGGTA TCCTAAAGGA
CGAGGAGAAT TGGTGAGTTT TGCTAATCGT ATGTATTTGG AAGACTCTTG GACATTAGAG
TCTGCTTATT CAGTCACGAT AAATCCAGAG GACAAGATTA ACGTTGAGCA AATAGTTAAT
GCTCGGGGTG TTCGCTTGCT TGGGTATTGG TATTTCGTTG ATGGCGAGAT ATTTTCAAAT
AAAAATCATG CAAAGTTATA TGAAATTTAT CAAATAATGT TAGGGCAACA TTATGGAAGT
GGTCTTGTTA TGGTCTCAGC AGAAATTGAG TACAGTACGT TAGACACTGA TAAGGCATGG
TTCAGTAGAA TGATGAGCAG CAAGTTTAAC GCTATCAATC AGATATTTCC GTAA
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| Protein sequence | MNDGSMRAPE ERHSVIGIIA LLIVVAFWVV TFWQGLVSAI DIWIISDIFN HCLFVIPASI
YFIYCKKEQL SLSAIRPNYW VLILCFGSLG LYGVGLSGGV QLFMHIATFT FLPFSIWFLL
GNEQAKRILF PLFFIVFCIP VGEELIPTLQ AVTADLSVMM LQWVNVPIYR SGLYIEIPEG
RFLVAEACSG ISFFIASVVI GSLYAYMNMQ SSVRRFSFVC ISILFPIIAN AIRVFGIILT
GHLTNMEHAV GADHLIYGWV FFSLVIICLI GLGELIREKS SDLKPETPLA IPFVSSNQVY
IKASVTISVS MLFFLFWYQL IQSQLVAGTS PERLKALPFT SAQVTANWSP EFVDFYDKNT
SRFAFENKAV DMYAVWYPKG RGELVSFANR MYLEDSWTLE SAYSVTINPE DKINVEQIVN
ARGVRLLGYW YFVDGEIFSN KNHAKLYEIY QIMLGQHYGS GLVMVSAEIE YSTLDTDKAW
FSRMMSSKFN AINQIFP
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