Gene Patl_1165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1165 
Symbol 
ID4173216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp1404989 
End bp1405546 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content44% 
IMG OID638054172 
Producthypothetical protein 
Protein accessionYP_660745 
Protein GI109897490 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.712882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAGAC ATTACTACAT AACTGATGAT TTAGGAGATT TAGAACAAGT TGAAAGGGAA 
CTAGTAGACA ACGGCTTGAC GGTACCTCAA TTTCACGTAC TCAGTGAAAA TGACGCCGAG 
TTAGAAAAAC ACCATTTACA TGCAATAGAA TCCGTCTTAA AAAAAGACGT CGTTCACTCC 
ACTCAGTTAG GCGCCGTTAT TGGCATTATC GGCGCATTCC TCATTTTATT AGTGGCGTAT 
TTATTTAATT GGCATATGAC GGCTGTAGGC TGGATCCCGT TTGGTTTTTG TGCGGTGGTC 
GTTTTAGGGT TTTGTACATG GGAAGGTGGC TTGATAGGCA TTCAAACACC TAATTACCAA 
TTTAAGCGTT TCCAGCAACT CCTTGGGCAA GGCATGCATG TCTTTTTCGT TGATATCACC 
GCTGAGCAAG AATCCGTGTT ACAACAGGTA ACGAGTCAGC ACCCCAGCTT GCGATACGCT 
GGTGCTGGCG AAGCCACACC AAGTTGGGTT GTTAACGGGC AACACAAGTT TAACCAAGCG 
ATGAAAGCTA TGCCGTAA
 
Protein sequence
MFRHYYITDD LGDLEQVERE LVDNGLTVPQ FHVLSENDAE LEKHHLHAIE SVLKKDVVHS 
TQLGAVIGII GAFLILLVAY LFNWHMTAVG WIPFGFCAVV VLGFCTWEGG LIGIQTPNYQ 
FKRFQQLLGQ GMHVFFVDIT AEQESVLQQV TSQHPSLRYA GAGEATPSWV VNGQHKFNQA 
MKAMP