Gene Patl_1159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1159 
Symbol 
ID4173210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp1400604 
End bp1401227 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content45% 
IMG OID638054166 
Productphosphoribosyltransferase 
Protein accessionYP_660739 
Protein GI109897484 
COG category[R] General function prediction only 
COG ID[COG2236] Predicted phosphoribosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTGGC GTGGTAATAG CCGCGATGTT AAGGACAAAG GTATGGAAAA AACATTTATT 
AGCGAAGATG CCCTGATCCA AGACGCATTT AGACTAGGGG TAGAAATATT CAATAGCAAC 
TACCGCCCCG ACTTTGTGGT GGGTATTTGG CGTGGCGGCA GCACTGTCGG CATTTATGTG 
CAGGAATGCC TGCAGTATTT GGGCGTTGAG ACTGACCATA TTTCAATTCG TACCTCCTAT 
CAGGGGCAAC CTGGTTATCA ACAGATGATT GATAGTGAAC AAGGCATTAA AGTGCATGGT 
TTGCAGTACC TATTAGAGAA CCTCAATCAA GATGATAAGT TGCTGATTGT TGATGACGTA 
TACAGCTCAG GCTTGAGTAT TAAGGCGGTT CTTGACCAAT TATCATCGCG CGCTAAGCGC 
AATATGCCCA AAGATTTCAA AGTCGCGGTG CCTTGGTTCA AACCCGCCAA CAACCGTACT 
GACAGGGTGC CTGACTATTT TATTAATACC TCAGATAAGT GGTTGATATT ACCCTATGAA 
ATGGTGGGGT TAACCCATCA AGAAATCATC GACAACAAGC CAGGTTTGAA AGCCGTTATG 
GATTCCATTG TCCCTACCCC ATAG
 
Protein sequence
MNWRGNSRDV KDKGMEKTFI SEDALIQDAF RLGVEIFNSN YRPDFVVGIW RGGSTVGIYV 
QECLQYLGVE TDHISIRTSY QGQPGYQQMI DSEQGIKVHG LQYLLENLNQ DDKLLIVDDV 
YSSGLSIKAV LDQLSSRAKR NMPKDFKVAV PWFKPANNRT DRVPDYFINT SDKWLILPYE 
MVGLTHQEII DNKPGLKAVM DSIVPTP