Gene Patl_1153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1153 
Symbol 
ID4173204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp1394887 
End bp1395483 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content46% 
IMG OID638054160 
Producthypothetical protein 
Protein accessionYP_660733 
Protein GI109897478 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCACTA ATATGTTACC CACTACGAGT GATAACAAAA TGAATAGCTT TCAAAACTAT 
CTGCTGATTG CGATGCCTAG CATGGAAGAT CCGTATTTTT CCCGCTCGGT GACTTACATC 
TGTGAGCACA ACGAGCAGGG CGCAATGGGC CTAGTGATTA ATCAGCCGGC AGGCATGAGT 
TTGAAAGAGC TTATTAACCA GACTGATAAA GAAGCGATAG TGGATGATGA AAAGGCCGAA 
AATATTGTTT TAGCAGGCGG GCCAGTGAGT CAGGATCGTG GTTTTATTTT GCATACCACC 
CAACCAGGTT GGAGTGCCAG TTTAGCGTTG ACGTCAGAGA TCATGGTTAC CACTTCAAAA 
GATATTTTGT CGTCACTGGG TAACAGCGAA GCACCTGAGA AGTCTATTGT CACCTTGGGC 
TATGCAGGTT GGTCAGCTGG GCAACTGGAA GAGGAAATTC GTGCCAACTC GTGGTTGATG 
GTAGAAGCGG ATACTGAATT ATTATTCGAC ACGCCTATCC ATAAAAAATG GGAAGCGGCC 
GTGCATAAGC TTGGTATTGA TACTTGGCAG ATCGCCCCCA CCGCAGGTAA TGCTTAG
 
Protein sequence
MATNMLPTTS DNKMNSFQNY LLIAMPSMED PYFSRSVTYI CEHNEQGAMG LVINQPAGMS 
LKELINQTDK EAIVDDEKAE NIVLAGGPVS QDRGFILHTT QPGWSASLAL TSEIMVTTSK 
DILSSLGNSE APEKSIVTLG YAGWSAGQLE EEIRANSWLM VEADTELLFD TPIHKKWEAA 
VHKLGIDTWQ IAPTAGNA