| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1131 |
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| Symbol | |
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| ID | 4173180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1369472 |
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| End bp | 1370527 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638054137 |
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| Product | cobalamin biosynthesis protein CobD |
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| Protein accession | YP_660711 |
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| Protein GI | 109897456 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTATCTT TTTCAAGCTT GGCTGTAATA GGCGCGCAAA TGCTGTTCGC CTTGCTGCTT
GATAAAGTAT TAGGTGAGCC TAAACGCTTT CATCCCCTTG TGGGGTTTGG GCATTTAGCA
AATCGCTTAG AGGCTAAAGC TAACGCTCAA CTATTCACTG CACAGCAAAC ATCCCTAGTA
AAAACACGCT TCAAAGGTGC TCTGTGTTGG CTCATACTTG TCCTGCCTCT ACCAATGACG
TTATGGGTGC TCAACTATGG CGTCATGCAA TATGCCATGA GCAACGACGC TGTATTGCTA
GCGGGCTGCA TGTTCTTATT AAACGCCTCG ATATTGTATT TAGCTATTGG CATGCAAAGC
CTCAAAGAGC ACGCCATGCA GATATACCAG CCATTAGCAG AAGGAGATTT AGCCCAAGCG
CGGCATTTCA CCAGCTATAT GGTTAGCCGA GATACTACCG AGTTAACGCC AAACAACATG
AGCCGCGCCG CAGTAGAATC TGTGCTAGAA AATGGTCATG ACGGCGTGAT AGCCAGCTTG
TTTTATTTTG CCATCGGCGG CGCTCCACTG GCGGTTCTTC ATCGTCTTAG CAATACCCTT
GATGCTATGT GGGGCTATAA ATCACCGCGC TTTTTGCACT TTGGTTGGTG GGCCGCCCGA
ACGGACGACC ATCTTGGTTG GTTAAGCGCT TATTGCACCT CCCTACTGTA TGTATTGGCC
GCTCCGGCAC CTATTCGTTT CACACATTTA GCACGCGCAT GGCAGCAAGC TAAGGGCTAC
AAGAGCAAAA ACGGCGGTCG CTGTATGGCC ACTGGCGCCG GTGCGCTTGG CTTCACAATT
GGGGGAGCAT CACAATATCA AGGCAACACA GTACATAGCC CAATATTAGG CAGTGGAGAG
CGCGTTACCT TGACCGACAT ACCGCGCAGT ATTCGCCTGG TGCAGCGCAG TGCCTGGCTA
TTTTCAAGTG CCATTTTGCT TTGTGGTTTA TTGGGGTTGA TAGGGCTAAT CGCACTATGC
GGCTTTTACG GCCTCAGTAC CGGCATCATT TTCTAA
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| Protein sequence | MLSFSSLAVI GAQMLFALLL DKVLGEPKRF HPLVGFGHLA NRLEAKANAQ LFTAQQTSLV
KTRFKGALCW LILVLPLPMT LWVLNYGVMQ YAMSNDAVLL AGCMFLLNAS ILYLAIGMQS
LKEHAMQIYQ PLAEGDLAQA RHFTSYMVSR DTTELTPNNM SRAAVESVLE NGHDGVIASL
FYFAIGGAPL AVLHRLSNTL DAMWGYKSPR FLHFGWWAAR TDDHLGWLSA YCTSLLYVLA
APAPIRFTHL ARAWQQAKGY KSKNGGRCMA TGAGALGFTI GGASQYQGNT VHSPILGSGE
RVTLTDIPRS IRLVQRSAWL FSSAILLCGL LGLIGLIALC GFYGLSTGII F
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