| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1111 |
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| Symbol | |
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| ID | 4172286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1341544 |
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| End bp | 1342527 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638054117 |
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| Product | hypothetical protein |
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| Protein accession | YP_660691 |
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| Protein GI | 109897436 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0480419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCCTCAAC CTAGAAAAAA CCAAATCAGC CTAATTGATA CCCCCTATTA CCACTGCATT
TCGCGATGTG TTCGGCGCTC TTACCTATGT GGTATTGATA AATACTCTGG TCAAAGTTAC
GAGCACCGTC GAGGTTGGGT TGAGGATCGT TTACTATTTT TGTCGACCGT ATTTTCCATC
AGCATTTGTG CATACGCAGT AATGAGTAAT CACACACATA TAGTGCTACA CGTAGATGAT
TCAGCAGCGA ATGATTGGAA AATTGACGAG GTATTACGCC GCTATCACAA AATACATAAG
GGCACCTTAC TCACGCAGAA GTACGTCTGT GGTGATAAAC TCACTCCAGG TGAGCTGATT
ACCTTTGATG AAACTGTTGA GCTATATCGA AAGCGTTTGT ACGACATCAG TTGGTTTATG
CGTGATATCA ATGAATATAT TGCCAGAGAG GCGAATAAAG AGGACTGTTG CACTGGTCGA
TTTTGGGAAG GGCGATTTAA ATCTCAAGCA TTGTTAGATG AAAGTGCACT GTTAGCATGT
ATGGCCTATG TTGACTTAAA CCCCGTTCGA GCTAAAGTTG AAAAAACGCC TAAAACCTCA
AAATACACCA GTATAAAAAA ACGACTGCAA GCTTTTAATA ATAAGCAACA ACAACCAAAA
AATTTGATGC CCTTTATAGG CAATCCGAAA CAAAACTCCC CTAAGGGCGT CAGCTATTCA
CTTGAAAACT ATTGCGACCT AGTACAAACC ACCAGCCGCA GTATTATTGA TGACAAAGCC
GATCATATCG AAAAATACCA AAGCCCAATT TTACAACAGT TAGGCTTAGA TTCAGCGCAA
TGGTTAATTT TAGTGACTGA GTTCGAAAAG CACTTCTTTT GTGCTGCAGG TGCAGAGCTG
ATAATGAACA CCTTCAAACG GCATACCCAT CATCAACGTA TTAGAGGTAT GGGAAAAGCC
AGAGAGTTAC TTAAACGAGC GTAA
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| Protein sequence | MPQPRKNQIS LIDTPYYHCI SRCVRRSYLC GIDKYSGQSY EHRRGWVEDR LLFLSTVFSI
SICAYAVMSN HTHIVLHVDD SAANDWKIDE VLRRYHKIHK GTLLTQKYVC GDKLTPGELI
TFDETVELYR KRLYDISWFM RDINEYIARE ANKEDCCTGR FWEGRFKSQA LLDESALLAC
MAYVDLNPVR AKVEKTPKTS KYTSIKKRLQ AFNNKQQQPK NLMPFIGNPK QNSPKGVSYS
LENYCDLVQT TSRSIIDDKA DHIEKYQSPI LQQLGLDSAQ WLILVTEFEK HFFCAAGAEL
IMNTFKRHTH HQRIRGMGKA RELLKRA
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