| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1102 |
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| Symbol | |
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| ID | 4173631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1326404 |
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| End bp | 1328806 |
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| Gene Length | 2403 bp |
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| Protein Length | 800 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638054108 |
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| Product | hypothetical protein |
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| Protein accession | YP_660682 |
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| Protein GI | 109897427 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGTTAT TAAGGGGAAG GGGCGTTGTT TTTTTATTGA GCGCGCTAAT GTGTTTAATG
GCTGGCGCGG CGAACGCACA GAGTATTGCT GAATTCACCG ATGGGATGGA GCACAAAGCT
GGCTTTTTTG ATTTTTATTA CGACGGCGAG AACGACAAAG TCTATTTACG CATCGATAAG
CTGTCGCAGC CGTTCTTATT TCAAAGCAGC ATGCCCCAAG GTATTGGCTC GAACGATATC
GGCCTTGATC GTGGTCAGTT AGGCAAGACG CGCTTGGTCG AGTTTCAACG CTTTGGTAAC
AAAGTGATGC TCAAACAACT AAATACAGCG TATCGAGCGA CATCAGCTAA TCCCGCTGAA
CAGGCCAGTA TCGATGAAGC GTTCGCTGAC TCTGTATTAG TAGGATTACC TGTTGTCGCC
TCTAACGAAA AGATTGTGCT GGTGGATTAC ACGGATTTTC TACTGTCTGA TATTCACCAG
ATTAGCGATC GTTTAAATAC GACCAAGCAG GGCAGCTATA GCCCTGATGC TACCCGAAGC
GGTGTATATT TAGCGCGCAG CAAAGCCTTT GTGGATAATA CCGAGCTTGA ATCACTGGTG
ACGTTTGCTG GTAGCCAGCC CGGGGAGTAT GTAAAACAAG TGACGCCTGC GCCAAAGAGT
ATTTCGGTGC ATTTGCACCA CTCGCTTGTT CGCTTACCTG ACAATAAGTA CCAACCACGC
AAGTTTGTCC CGTTTTCAGG GTATTGGGCG TTGGGTTATC AGGACTATTC AGCGCCGCTT
GATCGAAGCA TGACGACGCA GTTTATTCCT CGCCATCGCC TAAGTAAGAA AAACCCCAAG
GCTAAAACCA GTGAAGCGGT TGAGCCTATC GTGTACTACC TCGACCCAGG TATTCCTGAA
CCCGTTTTAG GTGCATTACT TGACGGTGCG CGCTGGTGGA ACCAAGCCTT TAGTAAAATT
GGCTACAAAG ATGCGTTTCA AGTGAAGGTG CTACCAAAAG GTGCTGACCC AATGGATGTG
CGCTACAACG TGATCCAATG GGTGCACAGA GCGACTCGCG GTTGGTCTTA CGGCAGCTCA
GTGGTTGACC CTCGCACGGG GGAAATCATC AAAGGCCACG TAACGCTTGG TTCGTTGCGA
GTTCGCCAAG ATTATTTAAT CGCTCTTGGC TTAACCAGCC CCTTCACTAA AGCGGAAGGC
GTTACTGACA CGCAAGCGCA ACAAGAGATG GCGCTGGCGC GTATTCGTCA ATTGTCTGCC
CATGAAGTGG GGCACACCTT AGGTATTTCC CATAATTTCG CTGCCAGCGA GTATGGCCGT
GAGTCAGTAA TGGATTATCC GCATCCGCTT ATCACCGTAA AAAACGACAG AATCAGTTTA
GAAGGTGCTT ACGCGACAGG CATGGGTAAA TGGGATGACT ACGTGATTGC CTATGGCTAC
CAAACCTATG TCAATACTCA AGATGAAACG ACAGGCTTAA ACGAATTGGT GACACAAGCA
CGTGCCAGTG GCATGCGTTA TCAATCCGAT CCCGATGCTC GGCCTTTACA CGCGGCTAAC
CCATCAGGCA GTTTATGGGA TAATGGTGAA GATGCCGCGG CTGAGTTAAA GCGAATTAGC
GATGTTCGCA GCGTTGCAAT GCAGCAGTTC GGTATTAACA GCATTCCTAC TGGCGATACG
TTATCTTCAT TAGAAGAGCG TTTTGTACCA ATATATTTAC TTCATCGTTA TCAGTTAGAT
GCAGCGGCAA AACTGATTGG CGGGGTGGAA TATGAGTATG AAAGTAAGGG GGATTATAAT
AATGCTAAAG GCGCGAAGCC GGTTGACGAT AAAGCGCAAC AAGCAGCATT GAATGCGATT
TTGGATACCA TGCAACCTGC CTTTTTGAGT GTGCCTGAAC ATATCGTAAA ATTAATCCCG
CCTAAAGCCT ATGGTGAATC ACGCAACCGC GAGAGCTTTA AAGGTCGTAC TGGGCTAACG
TTCGACCCGG TATCGGCTGG GGAGTCCGCG GCAAATTACA GCTTGTCCTT GTTACTGCAA
CCTCAGCGTT TAAATCGATT GGCGCAGCAA CATAGTCTGA ATAAAGAAGC CCCGAGCGTT
CATAGTGTTA TCTCCACTTT GTTGGCACGC AGCTTAAAAC AAGACAGCGC TAACCAACTT
GCACAGCGGA TCAATTATGT GGTGCTCGAT GGTTTAGTCA AATTGTTAGC TTCGCCTGAA
TTAGCACCGG AAGTGGCAAG CGCGATTGAA TTACAACTGC GCGATTTAAC CCAGTGGTTA
GGCAGCTTGA AAAAGCGTGG GCAAAACCGC GTGTTAGCGG AACAGCTTAA TCAGTTTTGG
CAAACTGGAA AATGGCCAAC ACATTTCGAA CCCAAGCCTT TGCCACCAGG CTCACCCATT
TAA
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| Protein sequence | MLLLRGRGVV FLLSALMCLM AGAANAQSIA EFTDGMEHKA GFFDFYYDGE NDKVYLRIDK
LSQPFLFQSS MPQGIGSNDI GLDRGQLGKT RLVEFQRFGN KVMLKQLNTA YRATSANPAE
QASIDEAFAD SVLVGLPVVA SNEKIVLVDY TDFLLSDIHQ ISDRLNTTKQ GSYSPDATRS
GVYLARSKAF VDNTELESLV TFAGSQPGEY VKQVTPAPKS ISVHLHHSLV RLPDNKYQPR
KFVPFSGYWA LGYQDYSAPL DRSMTTQFIP RHRLSKKNPK AKTSEAVEPI VYYLDPGIPE
PVLGALLDGA RWWNQAFSKI GYKDAFQVKV LPKGADPMDV RYNVIQWVHR ATRGWSYGSS
VVDPRTGEII KGHVTLGSLR VRQDYLIALG LTSPFTKAEG VTDTQAQQEM ALARIRQLSA
HEVGHTLGIS HNFAASEYGR ESVMDYPHPL ITVKNDRISL EGAYATGMGK WDDYVIAYGY
QTYVNTQDET TGLNELVTQA RASGMRYQSD PDARPLHAAN PSGSLWDNGE DAAAELKRIS
DVRSVAMQQF GINSIPTGDT LSSLEERFVP IYLLHRYQLD AAAKLIGGVE YEYESKGDYN
NAKGAKPVDD KAQQAALNAI LDTMQPAFLS VPEHIVKLIP PKAYGESRNR ESFKGRTGLT
FDPVSAGESA ANYSLSLLLQ PQRLNRLAQQ HSLNKEAPSV HSVISTLLAR SLKQDSANQL
AQRINYVVLD GLVKLLASPE LAPEVASAIE LQLRDLTQWL GSLKKRGQNR VLAEQLNQFW
QTGKWPTHFE PKPLPPGSPI
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