| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1097 |
|---|
| Symbol | |
|---|
| ID | 4173626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 1319374 |
|---|
| End bp | 1320021 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638054103 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_660677 |
|---|
| Protein GI | 109897422 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTGA TGAATATGGA TAAAAAGATA TTTTGTGTAG GTTTAAACAA AACAGGAACG
TCTTCGCTAC ACCAGGCCTT TACCATGCTC GACATAAAGA GCGTGCATTA TAAAGGAGTT
GAGAAAACCG ACATTAAAGA AATTATTCAG ACCAACTATC TTGCGGGCAA CAACATACTT
AAAGGAATAG AGCATTACGA AGCCTATTCA GATTGGGATT TGGGGCCCTC TACGATCGAT
ATCGTAAAAG AGTTTGATAA ACAATATCCT AACAGTAAGT TTATATTAAA TATCAGAGAC
ATGGAGGGTT GGCTTGACAG TAGAGAGAAG CATGTAAAAA GGAACCAAGA GAGAAAAAGA
AAGGAGCCAG ATGCTGATAT CAATTGGCTA ACGATAGACA GAGAAGCTTG GGCAACTCAG
TTTAAACGTC ACTATGACGG CGTGACTAGT CACTTCAAAG GTAGAGAAAA CCAACTATTA
GCCTTTGATG TCACCCAAGG TGATGGTTGG GAGAAATTAT GTCCCTTTCT TGAATTACCT
ATTCCCCGCG CCATATTTCC TAAAGAAAAT ATGGCGGCGC ATAAAAATTC ACTTTATTGG
AAAGGACGAC GAAAATTAAA AAGAATATTA GATCACATTG TCAGATAA
|
|---|
| Protein sequence | MELMNMDKKI FCVGLNKTGT SSLHQAFTML DIKSVHYKGV EKTDIKEIIQ TNYLAGNNIL
KGIEHYEAYS DWDLGPSTID IVKEFDKQYP NSKFILNIRD MEGWLDSREK HVKRNQERKR
KEPDADINWL TIDREAWATQ FKRHYDGVTS HFKGRENQLL AFDVTQGDGW EKLCPFLELP
IPRAIFPKEN MAAHKNSLYW KGRRKLKRIL DHIVR
|
|---|
| |