| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1092 |
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| Symbol | |
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| ID | 4173621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1312303 |
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| End bp | 1313250 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638054098 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_660672 |
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| Protein GI | 109897417 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.221871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAGTA ATAAGAGCAT TAGTACCAAA ATTGTCGATG TCGGTGTTGT TATTCCTGCT
TATAATTGCA GCCAAAGTAT TCTAAAGGCA CTTGAATCTA TTTTCATGCA AAGTGCGCTG
CCTAAAGAAG TCATCATCGT TGACGATGGC TCCAAGGATG ATACGCAACT AGTAATTGAA
GGCAGTGAGT ACGCAGATCG CGTTACCTAT GTGAAACAGG GCAATGCAGG CCCTTCTAAA
GCCCGTAACC ATGCTATTTC TATAGCGACA GCCAAGTGGC TAGCTTTTTT AGATGCTGAT
GATTTATGGA TTCATAAAGA TAAACTGCGC CTACAAATGG AATTGGCTGA CAAGCATGCC
GATGCAGTGT TAATCGATAG CTATGCTTCT ATCGATTGGC ACGGACAGAG AGAAGAGACG
GAATCGCGTC AGAAAGACGG CGATGTTTTA AGACAATTTC TTTATAGCAA CATTATTAAT
GCGACCTCTT CGGTGTTAGC GAAAAGAGAC AAAATTGTTG AAACCGGCGG GTTTGTAGAT
GATTTGCGTT TCGGTGAAGA TAGACTATTG TGGGCTCAAT TAGCAAAGGT AGGTGGTGTG
TATACACTAC CTATTGTGAC TGTGAAAAAG TTTAATGCAA TTGGTAATTT AACGTCCAAA
GGCGACAAAA ACTATCACTA TCGCGTCGAT TTGGTAAATA GACTGCTCGG GTTTATTGAC
GCGCCAAAGG CAGAGCTTGC AGACATATGG TTGACCAATG TCGTCGACTT TTTCCGTTTA
AGTTTCAAAG CAAACGACTC CGATACTTAC CTGTTGATAT TTAATGACAC ATTAAAGCAT
AAAGGGCCTA ATTTATGGTT TAGTAAATTT GGCTTTTTGG CCTTACATGC AAAATTATTT
AATACCTTTG AACCGCTGCT TTTTTTAAAG CGGGCCTTAA AAAAATAA
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| Protein sequence | MISNKSISTK IVDVGVVIPA YNCSQSILKA LESIFMQSAL PKEVIIVDDG SKDDTQLVIE
GSEYADRVTY VKQGNAGPSK ARNHAISIAT AKWLAFLDAD DLWIHKDKLR LQMELADKHA
DAVLIDSYAS IDWHGQREET ESRQKDGDVL RQFLYSNIIN ATSSVLAKRD KIVETGGFVD
DLRFGEDRLL WAQLAKVGGV YTLPIVTVKK FNAIGNLTSK GDKNYHYRVD LVNRLLGFID
APKAELADIW LTNVVDFFRL SFKANDSDTY LLIFNDTLKH KGPNLWFSKF GFLALHAKLF
NTFEPLLFLK RALKK
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