| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1085 |
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| Symbol | |
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| ID | 4172624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1303915 |
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| End bp | 1304985 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638054091 |
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| Product | glycosyl transferase, group 1 |
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| Protein accession | YP_660665 |
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| Protein GI | 109897410 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAC TATCGGTACT GTCTTATCAT CCTAATCGAT GCTCAGGTTT TGGTGGCATT
GAAAACCTTG TTAGGTCTAT CAAGCTCTCT ATTGAGCAAG GTAATATTGC ATTTTATGAG
CTGTACAATA GAGAGCCTCC TGTTGAAGAA ATTGAAATTC CTCGTACTGA ATTTGATATT
AAGAAGAAGC TTCATTTTGA ATCGGGCTTT CTCGCTACGC TTAATAAAGC GTTTGTTTTT
TATAAAGAAG CTGTACGGGG TAAGTACGAC GTTGTTATCA CTTATCACCC GGCAAATTTG
CTGTTTTTTT TACTCACCAA ACACAAACCT AAAATCATTT TAGTTCAGTC TAATAGCGTC
AAAGAGCTTT TTCAGGGACG TATTCTAAAA GCATTAGCCC AAAAAATTCT TAATCGAGTT
GACGCGCTAA CGTTGTATAC CTCATTTGAC AAAAAAGCAC TGTGCCAGCG ATTTGAGGTC
GAAGACAGCA AGATGTTTAT TATACCCAGA GCATGTAAGT TGCCCACCAC AGCGCCGCGG
CAAAATAAGA ATAACAAGCT GGTTACTATA TGCAGGATCG CCGAAAATCA GAAGAACTTT
GCAGCTATGG TTGACGTTGT GGCGAAGATG CCAGAGCTGA CGCTTGATAT ATATGGCGCG
GGCTCTAGTG AAGAAGTTAA TCAGTTAGAG AAGAAAATTT CAAACGTTCC TAACATTAGG
TTTCTAGGCA AAACCAATGA TGTTGCAAAA ACCTTGTCGG AGTACAGCGT ATTTGTCATG
ACTTCATATT ATGAAGGTTA TGGCCAATCG CTTATAGAGG CAAGAAGCCA AGGTTTACCT
ATTGTTCTTT TCAATACATT TGATGCTGCT CAATCAGTTG TAGTCGATGG TAAAAACGGC
TTTTTAATAG AACCGTTCGA ACAAGAGGCA TTTAGAGATG CGATACGCAG TATTTTGAAA
TCTGACTCAG AATATCAGCG AATGTCCCAT GAAAGTGTTG TCCTATCAGC GACCACTGAC
ACTACCTCAA TTCAAAATAA GTGGTTTTCG CTATTTACAT CGTTTCAGTA A
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| Protein sequence | MKKLSVLSYH PNRCSGFGGI ENLVRSIKLS IEQGNIAFYE LYNREPPVEE IEIPRTEFDI
KKKLHFESGF LATLNKAFVF YKEAVRGKYD VVITYHPANL LFFLLTKHKP KIILVQSNSV
KELFQGRILK ALAQKILNRV DALTLYTSFD KKALCQRFEV EDSKMFIIPR ACKLPTTAPR
QNKNNKLVTI CRIAENQKNF AAMVDVVAKM PELTLDIYGA GSSEEVNQLE KKISNVPNIR
FLGKTNDVAK TLSEYSVFVM TSYYEGYGQS LIEARSQGLP IVLFNTFDAA QSVVVDGKNG
FLIEPFEQEA FRDAIRSILK SDSEYQRMSH ESVVLSATTD TTSIQNKWFS LFTSFQ
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