| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1077 |
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| Symbol | |
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| ID | 4172616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1290862 |
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| End bp | 1292163 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638054083 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_660657 |
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| Protein GI | 109897402 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.9264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGTCG TTATTTTCTC ATTGTCTCTG GCGTGCGCGT ATTTGCGAAG AACAAGACCT
TGGATGGGCT TACGTGCTTA CAGACTGCCA ATAGGTCTCT GGTTGGTTTT CTTGGGATTC
GCCATCATTC AGATTATCCC CTTACCCGCC TCTGTTATAA ATGCCCTGAG CCCGATGAGT
TATGAAGCTC AACTACATTA TGGTGTTGAG CAGTTTCATC TATCGTTGGA TATTGGTCAA
AGCTATATCA ATTTGCTTAA AAGCCTTAGC TATTTCTGCT TGCTCATTGT TGTATTAGTG
TTAGTGGATA CTGAAAAGCG CTTACGATTG ATTTTGCTTA CCATGTTAGC CAGTGGCGCG
ATTCAAGCCT TATACGGCAC ACTAGAGATT CTAGCTGGCA ACGAGTACAG CATGATTTTC
GGCTTACCTG TCAGTGATGT GGCGACGGGT AGCTTTGTTT ACAAAAATCA CTTCGCTAAT
TTCTTAGTGC TGACTTTATC AGCTGGTATA GGCTTAATGG TAGCCAGCCT GCAAGGTAAC
CAAAGTGGCA GTCCTAGAGA TATTATGCGC TCAATATTGT CGACGTTACT GGGCAGTAAG
GCACTGATTC GCATTAGTTT GGCCATCATG GTAATTGCGC TGGTTATGTC TCGCTCACGA
ATGGGGAACG CAGCATTTTT TGCGGCTATG ACCCTGATAG GAGTTTTGGC TCTGGTGATA
ATTAAAAACC GCAGCCGAGG CTTGTCCATT TTAATTGTTA GTATGTTCGT GATTGATGTT
TTTATAGTCA GCGCATGGTT TGGACTCGAT AAAGTGCAAG AGCGTTTAGA GAGCACCAAC
CTATCTCAAG AAGGCAGAGG TGATGTTGTT ACGGACGCTA TGCCTATGCT CTTAGACTTC
CCCTTATTCG GTAGTGGTGG TGGTAGTTTT TATAGTACCT TTCCTAGCTA CAAGATATCT
AATATTCACT CGTTTTACGA CCATGCGCAT AACGATTATC TGCAAATGGC GATTGAATAC
GGAGTCCCCG CGACACTATT TTTAGCTTTG CTTGTTTTAT GGTGTTTTGC CAAGAGCGTG
CGAGCGATGC GCAAACGTCG CCCCTCTATT TTAAAGGGAA CCGCATTCGC GTGCTGTATG
GCTATCCTAG GAATGTCATT ACACATGACG GTTGATTTCC CGCTGCAAGC ACCTGCGAAT
GCATGTTATT TTGTCGTTTT TTTAGCTTTG TCTTTAGCCA TCAATCAGCT AAAAATAACA
AGGGGTAAAA AGCGACATTC AAATAAGAAG GTAGCGGTAT GA
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| Protein sequence | MEVVIFSLSL ACAYLRRTRP WMGLRAYRLP IGLWLVFLGF AIIQIIPLPA SVINALSPMS
YEAQLHYGVE QFHLSLDIGQ SYINLLKSLS YFCLLIVVLV LVDTEKRLRL ILLTMLASGA
IQALYGTLEI LAGNEYSMIF GLPVSDVATG SFVYKNHFAN FLVLTLSAGI GLMVASLQGN
QSGSPRDIMR SILSTLLGSK ALIRISLAIM VIALVMSRSR MGNAAFFAAM TLIGVLALVI
IKNRSRGLSI LIVSMFVIDV FIVSAWFGLD KVQERLESTN LSQEGRGDVV TDAMPMLLDF
PLFGSGGGSF YSTFPSYKIS NIHSFYDHAH NDYLQMAIEY GVPATLFLAL LVLWCFAKSV
RAMRKRRPSI LKGTAFACCM AILGMSLHMT VDFPLQAPAN ACYFVVFLAL SLAINQLKIT
RGKKRHSNKK VAV
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