| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1065 |
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| Symbol | |
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| ID | 4172851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1274707 |
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| End bp | 1276050 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638054071 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_660645 |
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| Protein GI | 109897390 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAA ACAATAAAAA AAGCAGTAAC CTCTCACGCC AGGTTTTAGG TTTGGCATTA
TGTGCAGTGA TTGGTCTGGG CATTAATGTC ACGCCGGTGG CAATGAAAAA TGCTCAGGCA
CAAGAAGACA GTCAACGTGA AACCCGAAGA ACGCCAGCCC TTAGAGTGAA AGTGTACGAC
CAACTTTCCC GAGCGCAAAA ATTGGCAGAT GAAGGTAAAA CTGACGAAGC CCTTGAAGCC
TTGGATAACG TGAAAGGTAA AGCGAGTTCA ATGAACAGCT ATGAGCTGGC CATGATGTAT
AACTTCTATG GTTTTATTTA CTACAACGTT GAGCGCTTTG ATGAAGCGAT TGCCTCGTTT
GAAACCGTGG TAGAGCAACA GCCAATCCCA GAGTCATTTG AACTAAGCAC CTTATTTAGC
TTGGCGCAAC TGCACATGAT GCGCGGCAAT TTTGACAAAA CAGTGGCCTT TTTAGAGCGC
TGGGAAACGT TAAATGCCTC GGTTAATCCA AACTCTGAAA TACCCGCTAA AAACTACGTG
TTAAAAGCGC AGGCTATGTA CCAGCAAAAG TCTTACGATA AAGCCGCGAG TTATATCGAA
AAAGCGATTG AGATTGTTGA AGCACAAGAC GATATTCCAG ATGAAAATTG GTATGTATTG
CAACGTGCGG TGTATTACGA ACTAAAGCAA TCTGAAGACG TGAAAGACGT GCTGCTGAAA
TTGGTCAGGC ATTTTGATAA GCCCAAATAT TGGGTGCAAC TTGCTGGCAT GTACGGAGAA
CTAGGCGAAG AGCAAAAGCA ATTAGCCATT CTTGAAACCG CGTATCAGCA AGGCTACATC
GAAAGCGGCT CTGATATGTT TAACCTCGCG CAGCTTTATT ACTACCACCA AATGCCGTTT
AAAGGCGCTC GTTTAATTGA AAAGGGCCTT GAGAGCGGCG TGCTTGATAA GAACCTTAAA
AATTTGAAGT TCCTTTCACA ATGTTGGGTG CTCGCTAAAG AAAACGAAGA GGCGGTACCT
GTGATGAAGG CTGCCGCTGA TTTGTCTGAT GATGGCGAAC TAGACGCGCA GTTAGGGCAA
ATTTATCTCA ACATGGAGAA GTGGCAACAA GCTATTTCAG CGTCAGAGGC GGCGTTAGGA
AAAGGCGGTT TACGGAACGA AGGCACGGTG CATTTAGTTA AAGGCATGGC ATTTTTTAAC
GTAGGGCAAT ACAACGAAGC ATTGAATGAA TTGGCCGAAG CCGAGAAATT TAATAGCAGT
AAGGGTATGG CGCAGCAATG GTCAAAGTTT GTAGAAACTG AAAAAGCCAG CGCTGACCGA
CTCACTGTTT CACTTTCTCA GTAA
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| Protein sequence | MKLNNKKSSN LSRQVLGLAL CAVIGLGINV TPVAMKNAQA QEDSQRETRR TPALRVKVYD
QLSRAQKLAD EGKTDEALEA LDNVKGKASS MNSYELAMMY NFYGFIYYNV ERFDEAIASF
ETVVEQQPIP ESFELSTLFS LAQLHMMRGN FDKTVAFLER WETLNASVNP NSEIPAKNYV
LKAQAMYQQK SYDKAASYIE KAIEIVEAQD DIPDENWYVL QRAVYYELKQ SEDVKDVLLK
LVRHFDKPKY WVQLAGMYGE LGEEQKQLAI LETAYQQGYI ESGSDMFNLA QLYYYHQMPF
KGARLIEKGL ESGVLDKNLK NLKFLSQCWV LAKENEEAVP VMKAAADLSD DGELDAQLGQ
IYLNMEKWQQ AISASEAALG KGGLRNEGTV HLVKGMAFFN VGQYNEALNE LAEAEKFNSS
KGMAQQWSKF VETEKASADR LTVSLSQ
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