| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1057 |
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| Symbol | |
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| ID | 4172843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1265043 |
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| End bp | 1265750 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054063 |
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| Product | lipase, class 2 |
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| Protein accession | YP_660637 |
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| Protein GI | 109897382 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.24448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATAA TAAAAGAATG TTACAGAATA CGAATATTGG CGCTGTTAAT GTGCTTGGCT
CTGCCGTTCA ATGCATTTGC CTGTAAAGAC GCAGTGGTAT TAGTCCATGG CAATACGGCC
ACACCTGCCA GTTGGGATAA CACCTATGAT CATCTGCTAG CTAATGGCTA CAGTAGTAGC
GAAATCTATA AACCGGATTG GGGTTCGAAG AACTGCGCCG CCTGCAACAA CCATAGCGGC
AGTGAAGAAA CGCCCGTGCG CCAAGCAATA CAAAGTGCTC TAGCCTCATC CTGTACAGGC
AAGATTGATG TGATCGGTCA TTCGATGGGA GCAACATTAG CCGCTCAGCA AATTGATAAA
CTTGCCATTG CCAACCGGGT AGATACCTTT GTGGGGATTG CCGGGGCATT TTTAGGCCTT
AAAAGCTGCG GTTATTACCC GTTTAATGTG TGGAGCTCTA CTTGTGGCTC AGCGGGATTA
TCCGTAGGCA GCCCATTTTT AGACAGCATT TATAATGTGC CGCTAGCTTC AAAAGTATAT
TCGATTAAGA GCTATATTGA CCAAATTGTA TGCTCAACCG GTGGCTGCAC TGTCGGCGGT
GTGCATAGTA GTCGTATCGT GAATGAAGAC GCTACGTTCA ATTACGCATT AGGACATTTT
GGTTTGCAAA CCGACACCGC CGTAAAACAA TACGAGCTAA TTCAGTGA
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| Protein sequence | MNIIKECYRI RILALLMCLA LPFNAFACKD AVVLVHGNTA TPASWDNTYD HLLANGYSSS
EIYKPDWGSK NCAACNNHSG SEETPVRQAI QSALASSCTG KIDVIGHSMG ATLAAQQIDK
LAIANRVDTF VGIAGAFLGL KSCGYYPFNV WSSTCGSAGL SVGSPFLDSI YNVPLASKVY
SIKSYIDQIV CSTGGCTVGG VHSSRIVNED ATFNYALGHF GLQTDTAVKQ YELIQ
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