| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0990 |
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| Symbol | |
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| ID | 4173492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1182154 |
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| End bp | 1182618 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053991 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_660570 |
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| Protein GI | 109897315 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
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| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.411714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTAGACA TTGTTTTATA TCAACCTGAA ATTCCACCGA ATACTGGCAA CATTATTCGT
TTATGCGCAA ACACTGGATT TGCCCTACAT TTAATTGAGC CTTTAGGGTT TGAATGGGAC
GATAAACGCG TTCGTCGCGC AGGCCTTGAT TACCATGAAT TTGCCAATGT GGTAAGGCAT
GCGTCACTAC AGGCCTATAT GGAATCACGC CAACCTAAGC GCATTTTTGC TTGCACCACT
AAAGGCACTA CTTTTTTTGC CAAAGCTGAA TATCAATTGG GTGATGCCTT GTTGTTTGGG
CCCGAAACGC GAGGATTACC TGATGACGTT ATTCAAAGCT TGCCGCCTGA ACAACGAGTA
CGCATTCCTA TGTTACCTGA CAGTCGCAGC ATGAATTTAT CGAATGCGGT ATCTGTTTTT
GTTTATGAAG CGTGGCGCCA ATTGGATTTC AGCGGCGCGG TTTAG
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| Protein sequence | MLDIVLYQPE IPPNTGNIIR LCANTGFALH LIEPLGFEWD DKRVRRAGLD YHEFANVVRH
ASLQAYMESR QPKRIFACTT KGTTFFAKAE YQLGDALLFG PETRGLPDDV IQSLPPEQRV
RIPMLPDSRS MNLSNAVSVF VYEAWRQLDF SGAV
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