| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0980 |
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| Symbol | |
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| ID | 4173829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1171851 |
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| End bp | 1172768 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053981 |
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| Product | ornithine carbamoyltransferase |
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| Protein accession | YP_660560 |
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| Protein GI | 109897305 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0078] Ornithine carbamoyltransferase |
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| TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGG ATCTACTGTC GTTCACTGAT TGGTCTGCTA AAGACCTCAA TGCACTCTTG
CAACTGGCCG TCACCATTAA GAATAATCCA GCTGACTACC GCCAAGCCTT GGCAGGTAAA
TCAATTGTTG CCTTATTTGA GAAACCGTCA CTGCGCACCC GAGTGAGCTT TGATATAGGT
ATCAACAAAC TAGGCGGGCA CCTTGTTTAT TTAGACAGCC AGTCAAATAA ATTAGCAGGC
CGTGAAGACG TGAAAGACAT GGGTAACAAC CTTGCCTGTT GGGCTGACGC TATTGTTGCA
CGGGTTTTTG CGCACTCAAC CTTAGAAGAA TTAGCCAGTT CAGCCAAAGT ACCTGTTATC
AACGCACTGT GTGATATGTA CCACCCGTGC CAAGCCATGG CCGACTACTT AACCTTAACC
GAACGTCTTG GCGATTTGAG CAAAGTTAAA CTAGCGTATA TCGGTGATGG TAATAACGTC
ACTCACTCTT TGATGATTGT GGGCGTGACG TTAGGTTGCG AGGTGGTTGT CATTACCCCT
CCTGGCCATG AAGTAGACCC TGCTATTGTC ACGCTTGCTC AGCAAAAAGC CGAGCAAAAT
GGTGGCAAAT TAGTTATCAG TCACGACGTT GAAGCGGCTA ACGGTGCTCA TGCACTTTAT
ACTGACACAT GGATTTCGAT GGGCGATGAC ACCCCACTTG AGACCATCAA ACAAGCGTTT
GGCAAATACA AAATCGATGA AGCGATGATG CAGTCAACTG GTGCTCAATA CGTTATGCAC
TGCCAACCTG CCCATCGCGA CTTAGAAATT AGCGGCACCT TAATTGATTC AGAGCAATCT
ATTTTGATGC AGCAAGCAGA AAACAGAATG CACGCCCAGA ATGCCATTTT AGTGCACCTT
CTTGGCGGCG CAGCTTAA
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| Protein sequence | MKKDLLSFTD WSAKDLNALL QLAVTIKNNP ADYRQALAGK SIVALFEKPS LRTRVSFDIG
INKLGGHLVY LDSQSNKLAG REDVKDMGNN LACWADAIVA RVFAHSTLEE LASSAKVPVI
NALCDMYHPC QAMADYLTLT ERLGDLSKVK LAYIGDGNNV THSLMIVGVT LGCEVVVITP
PGHEVDPAIV TLAQQKAEQN GGKLVISHDV EAANGAHALY TDTWISMGDD TPLETIKQAF
GKYKIDEAMM QSTGAQYVMH CQPAHRDLEI SGTLIDSEQS ILMQQAENRM HAQNAILVHL
LGGAA
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