| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0937 |
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| Symbol | |
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| ID | 4172144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1119084 |
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| End bp | 1119704 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638053938 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_660517 |
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| Protein GI | 109897262 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTTGGTTG ATTTCAACCG TGTAAAACAG CGAGGATTAG AAATGCAAGA AGACTTAATA
AATAAAAAAT CTATCCTTTC GGTTTTTTCA GAGTGCAAGT CGTCCTTAGC TAACGTGGTG
CGACGATACG TTAAAAAAGA ATACGAGTTA GAAGATATCC TACAAGAGGC CTTCGTAAAG
ACTTTTGTCG CAGATAGAAA AAATCAAATA AAATTCCCTA AGTTGTATTT ATACAAAACC
ACAAAAAACT TAGCGATCCG TGAAAATAGT AAAATTTCTA CCCGAATTAC TGAATATATA
GAGGATTCTA GTGAGTCATT GCTCATTAGC AAAGAACAAG ATGCTTTTGC CCATTTATCG
GAGCAACAAG AAAAAGCATT ATTGCTAGCC GCATTAAATT CGCTACCAAA ACAGTGCCAA
GAAGTAACGC GATTAAGGTT GATAGAAGGA GTTAGGGTAA AGGATATTGC GCTAAAATTG
AGCATTGCGG TTAGCACTGC AGAGAAGCAT ATCGCTAAAG GGTTAGAGCG CTGTGATGAT
TACATTACTA GACAGCAGGA AATAGGATTC ACTAAGCAAA GTGATATCGA ACGAAATATG
AATCAAAGAA AGAGTAAATA G
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| Protein sequence | MLVDFNRVKQ RGLEMQEDLI NKKSILSVFS ECKSSLANVV RRYVKKEYEL EDILQEAFVK
TFVADRKNQI KFPKLYLYKT TKNLAIRENS KISTRITEYI EDSSESLLIS KEQDAFAHLS
EQQEKALLLA ALNSLPKQCQ EVTRLRLIEG VRVKDIALKL SIAVSTAEKH IAKGLERCDD
YITRQQEIGF TKQSDIERNM NQRKSK
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