| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0924 |
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| Symbol | |
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| ID | 4171978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1099213 |
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| End bp | 1100481 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638053925 |
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| Product | DNA/RNA non-specific endonuclease |
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| Protein accession | YP_660504 |
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| Protein GI | 109897249 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1864] DNA/RNA endonuclease G, NUC1 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCTT ACGATCCTGA TTTTCTTGAT GACTTTCTTT TACCCTTACC AAGCTTTGCG
CCGCACCTTG ATGAAAGCAT CGTGCGAGAT GATGATTTAA CTGAGCATTA TGTGGCTGAT
TATGTGCACT ATTCATTGGT CATGAACGGT GCGCCAGAAA GGCGCTCCGC TGTTTACGTG
GCACTTAACG TTGATCAGAA TAAACACAAG CAAACCAGTC GCAGTAATCG CTGGCGCATT
GACGGCCGTA TTGGCAGTAA GTTTCAGTTA GATAATACCT ATTATCGCAA TAACGACTGG
GATCGCGGCC ATATGGCAAG GCGCACCACT GCCGCGTGGG GTGATAACGC AATTGATGCC
CAGCGCGCGT CTAACGAAAC GTTTTACTAC ACAAATGCGT GCCTGCAACA TGCCAATCTA
AACCAAGATG AATGGCTAGG GCTTGAAGAC TGGGTGTACG GTTTAGACTT AGATAAAGAC
GGTAAGATCA GCTCGTTCTC TGGCCCTTTT TATGCAGATT ATGATCGTAG CGTGCATCCA
AGTGGCCATG CGTTGGCATT AGTGCCTGCG GGCTTTTTCA AAATCGTGTG CTTTGTCAAT
CAGGCGAATG AATTGGAGGT GCGCGCGTTT GTCATGTTTC AAGACGAAAA AGCCTTAGCG
GACAAATCTG GGCGCAAAAA ATACAATAAC CAAACTTATC AAACCACAGT CACTTACATT
GAAGAGCTGA CAGGATTGCA ATTCGAGCCA GAGGTTTACC ACGCTAACCC TATGACCCAT
TGCGATTCGA GCACTCATAC CCGCGGGCCG AACAGTGTTA ATGGTGAGCC AATTTTAACG
CCTGAGCTGA TTGAAGTGGC CAAGCCAAGT GATATTCAAA ACACGTCAGG GCCTAGGCAA
ACGGTAAAAG ACGACGTGGT GGATATATTT ATCAGTGCTG CCATGGTTAA CCCTGAAGGC
AGTGACAAGG GCACTGAGTG GATAGGGCTA ATTAATCTCG GCGCGGATGC GATTGACCTA
ACAGGCTGGA GCCTGTCTGA CAATCAAGAC AACGCTGTTG CGGTAGGGCA AGTCACGTTA
AAGCCGGGTG AGTCAACAGT GGTAAAACAG CTCGGTAAAA TTCGACTAGC GAATACAGGG
GACGTGATCA AGCTGCATGA TGACCAGAAA AACAGAATTG ACTGGGTAAA CTACACCGAA
AAAACGGTCA AACCCGGCGC GCCTGTGCTG TTTTTATCCC CCAGAGATAC GCTCGAATTA
GATGTGTGA
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| Protein sequence | MSAYDPDFLD DFLLPLPSFA PHLDESIVRD DDLTEHYVAD YVHYSLVMNG APERRSAVYV
ALNVDQNKHK QTSRSNRWRI DGRIGSKFQL DNTYYRNNDW DRGHMARRTT AAWGDNAIDA
QRASNETFYY TNACLQHANL NQDEWLGLED WVYGLDLDKD GKISSFSGPF YADYDRSVHP
SGHALALVPA GFFKIVCFVN QANELEVRAF VMFQDEKALA DKSGRKKYNN QTYQTTVTYI
EELTGLQFEP EVYHANPMTH CDSSTHTRGP NSVNGEPILT PELIEVAKPS DIQNTSGPRQ
TVKDDVVDIF ISAAMVNPEG SDKGTEWIGL INLGADAIDL TGWSLSDNQD NAVAVGQVTL
KPGESTVVKQ LGKIRLANTG DVIKLHDDQK NRIDWVNYTE KTVKPGAPVL FLSPRDTLEL
DV
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