Gene Patl_0917 details

Gene Information

• Locus tag: Patl_0917
• ID: 4171971
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 1091362
• End bp: 1092030
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 638053918
• Product: hypothetical protein
• Protein accession: YP_660497
• Protein GI: 109897242
• COG category: [S] Function unknown
• COG ID: [COG3403] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTCTC AAGGAGAACG ACCTTCATCG ATAGAAAACT TCATTAAGCA GGATGGTTTT 
CCCTGTGTCG GAGCAAAGAT AGCATTAAAT AAAGATCAAA TCGTCACACG TGATTTTGGT 
GATATTTTCT CAAATCAAAA TAATCAAAAT ATACTTGATG AGCTATATCA ATTTATAACT 
ATTTATAATT CGAGTAAGCC TTTATATTTT AGCTTTGTGG CCACTTTTAA AAACTCGATA 
TTAACGAGTG AGAAAGAGTT CGAAGACGCC TTGTGGAGTA AGCTCCAAAA TTTGTATAAC 
CGAGACTCAA TGACCCACAC GTGGGATAGA AGAGTGAGCG ATAACCCGGA TGATAGTGAA 
TTTAGCTTTA GTCTCGGCGG AGAAGCATTT TTCATCATAG GTCTCTCACC ATTTGCAGAG 
CGAAGAGCGA GAAGATTCGA ACACCCCACT ATCGTTTTTA ACCTGCATAG CCAATTTCAA 
ATATTGAAGG AAACAAACAA GTTCACGGCA TTAAGAGACA GAATCAGAAC AAATGAAGAA 
GTTTTTTCTG GCTCACCTAA CCCAAATTTA TACGACCATG GTGAACTTTC TGAAGCCCGG 
CAATACAGCG GTAGGGCGGT CAGCAATTCA TGGAGATGTC CATTTTCAAC GAGGAAAAAA 
GATGAGTAA 

 

Protein sequence

MNSQGERPSS IENFIKQDGF PCVGAKIALN KDQIVTRDFG DIFSNQNNQN ILDELYQFIT 
IYNSSKPLYF SFVATFKNSI LTSEKEFEDA LWSKLQNLYN RDSMTHTWDR RVSDNPDDSE 
FSFSLGGEAF FIIGLSPFAE RRARRFEHPT IVFNLHSQFQ ILKETNKFTA LRDRIRTNEE 
VFSGSPNPNL YDHGELSEAR QYSGRAVSNS WRCPFSTRKK DE