Gene Patl_0916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0916 
Symbol 
ID4171970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1090177 
End bp1090674 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content50% 
IMG OID638053917 
Producthypothetical protein 
Protein accessionYP_660496 
Protein GI109897241 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGATA TCATTACAGG ACTATTCAAA AATCCCGCCG AAGCAAGTGC AGCCATAACC 
ATGCTTGAAC ACAAAGGCTT CAGCGACGCG AATATTTCGC TAGTGGCTAA CGATTCAATT
ACCAAAGACA GTTTCGCCCT GACTGACCAT TCTAAATTAC CAGAGGGAGT TGCCATAGGT
GCTTCATCAG GTGGTGTCTT GGCGGCGATT GTCGGGGGGC TTGCTGCTGT TGGAGTGGTT
GCTACCGGCG GGGTAGGGGT ACTTGCGAGT GGTCCATTAG TGGCAGCTCT AGCGGCAGGC
GGAGCGGGCG CGGCTGCAGG CGGGATCATT GGTGGTGCGA TAGGCCTAGC AATCCCTGAG
CATGAAGTGA AATTTTACGA AGACGCGATT GAAGAGGGCT CTGTGCTAGT CGGAGTGCAC
TATGACAATA GTGATCAAAA AGATGTAATT AAAGAGACAT TTAAACACTT TGACGACGTG
AAAGTTGCTA GTGCGTAA
 
Protein sequence
MSDIITGLFK NPAEASAAIT MLEHKGFSDA NISLVANDSI TKDSFALTDH SKLPEGVAIG 
ASSGGVLAAI VGGLAAVGVV ATGGVGVLAS GPLVAALAAG GAGAAAGGII GGAIGLAIPE
HEVKFYEDAI EEGSVLVGVH YDNSDQKDVI KETFKHFDDV KVASA