Gene Patl_0910 details

Gene Information

• Locus tag: Patl_0910
• ID: 4171964
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 1080397
• End bp: 1082394
• Gene Length: 1998 bp
• Protein Length: 665 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 638053911
• Product: hypothetical protein
• Protein accession: YP_660490
• Protein GI: 109897235
• COG category: [S] Function unknown
• COG ID: [COG3533] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.027132
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAGGA AACGTATTGT GAATACAAAA TATGCCCACA ACAAAGCGAT CAACGCCAAT 
AGTAAAAGCC CGTTTGTAAA GTTTCGAAGC ATTAATATTG GTGACTGCCA GTGGACAGAG 
GGATTCTGGG CTGACAAATT CAAGCAAGCC GAGACCATCA TGGTGCCACA TATGGGGGAA 
TTGCTTAAAG GGGATGTTGG TCACGCTTAC AACAATTTCA AAATTGCTGC GAAAATGCAG 
GACGGCGAAG CAAAAGGCAT GTTGTGGCAC GACGGTGACT TCTACAAGTG GATGGAAGCC 
TGCATTTATG TGTACGGAAT CAATAAAGAC ACCGCATTAT TAACGGAACT AGATGAGATC 
ATCAGTGTGC TCGCAAGCGC CATGTGTAGC GATGGCTATT TGCATACCCA TAATCAAATA 
CTCGGCAAGC CTCGCTGGAA AGCGGTATGT GATCATGAGC TTTACAACAG TGGTCACCTT 
ATTCTAGGGG GGGTTATTCA CCACCGCGTT ACCGGCCAAA CCAATTGGCT CGATTTATCT 
ATTAAGCATG CTGATTACCT TTATGGTGTA TTTACCTCTA AAGACGAAGA ACTCGCTCGT 
TTCGGATTTA ACCCCTCGCA AATCATGGCC TTGGTTGAGC TTTACCGTGA AACGGGTGTG 
AACAAGTACC TTGAGTTAGC GGATATTTTT GTGACAATGC GCGGCTCTGT TCCGATGGAA 
TTACATGACT CGGTGCCTTA TTGGTTTACG GGCGATCAGT GCCAAATGAA AACCCCGTTA 
AGGGAAGAAA CAGAAGCGGT TGGCCATGCT GTTACCGGCA TGTACTTGTA CTCTGGTGCG 
GCAGACGTAT ATGCAGAAAC AGGTGAAACC GCCTTAATTG ACTCGCTGCA AAGCATTTGG 
TCAAGTGCCA ACGAGCGCAA AATGTATGTT ACGGGTGCGT TAGGTCAATG CCATCACGGT 
GCGTATGACG ATCAGAATAT GATCCACGAA GGGTTTATTG ATGATTACCT TATGCCTAAT 
TCGACCGCCT ACAACGAAAC CTGCGCGAAT ATATCGAATG CTATGTTCAA CTGGCGCATG 
CTTGGTATAA CCGGTGATGC TAAGCATGCA GATAACGTTG AGTTAGTACT GCACAATAGT 
GCGATGGTGG GGATCAGTGC TGACGGTGAA AAGTACTTTT ACGCCAATCC ATTGCGTATG 
AACTTCGGCC AGCGTGACTA TTCTGACCAC TGTGATTGCA CTGAATCTCC AGATAGAGAA 
GCTTATATCG AATGTTTCTG CTGTCCACCA AATTTGGTTA GGACCATAGC GCAAGTATCT 
GCATGGGCTT ACAGCCTTAC GGATAATGGC GTAGCGGTTA ACTTATTCGG CAGCAATAAT 
TTAAACACAA AACTGCTTGA TGGCAGTGAC TTGTCTTTAA GCCAAGTCAC TAATTTCCCT 
TGGGATGGCG CAATCTGCAT AGATGTAAAG GCGTGTAAGA CCGAATCGTT TGACATCGCA 
GTGCGTATTC CAGGGTGGGC AAAAGACGCA ACCGTTACCG TGAACGGCGA AACGATAAAC 
GGCGTTAAGA ACGGTGAATA CCTGACGTTG TCTCGCCAAT GGCGCGAAGG CGACAAAATT 
GCTATTGACC TACCCATGAA CACCACATTT GTTGAAGGGC ACCCCCGTAT AGAAGAAATA 
CGTAATCAAG TTGCGGTTAA ACGTGGGCCA CTTGTTTATT GTATTGAGAC ACCGGACTTG 
CCAGAGAATA CCGGGATCTT GGATGCTTAT ATCGCTTCTG ACGCACAGTT TGACGCTCAG 
TTCGACCAAA GCTTTTTGGG CGGCATGACG ACTATTAAAA CCCAATTGTT GGTGCGTCAA 
GACAATACAC AAAATATGTA TGATGAAGTA CAAAAACCTA CCTGGGGATC ACATCAGGCG 
CAATTCATAC CTTACTACGC GTGGAGTAAC AGGGGCACAG CAGAGATGAC CGTGTTCGTT 
CCAGTTGTGT GGAAATAG 

 

Protein sequence

MNRKRIVNTK YAHNKAINAN SKSPFVKFRS INIGDCQWTE GFWADKFKQA ETIMVPHMGE 
LLKGDVGHAY NNFKIAAKMQ DGEAKGMLWH DGDFYKWMEA CIYVYGINKD TALLTELDEI 
ISVLASAMCS DGYLHTHNQI LGKPRWKAVC DHELYNSGHL ILGGVIHHRV TGQTNWLDLS 
IKHADYLYGV FTSKDEELAR FGFNPSQIMA LVELYRETGV NKYLELADIF VTMRGSVPME 
LHDSVPYWFT GDQCQMKTPL REETEAVGHA VTGMYLYSGA ADVYAETGET ALIDSLQSIW 
SSANERKMYV TGALGQCHHG AYDDQNMIHE GFIDDYLMPN STAYNETCAN ISNAMFNWRM 
LGITGDAKHA DNVELVLHNS AMVGISADGE KYFYANPLRM NFGQRDYSDH CDCTESPDRE 
AYIECFCCPP NLVRTIAQVS AWAYSLTDNG VAVNLFGSNN LNTKLLDGSD LSLSQVTNFP 
WDGAICIDVK ACKTESFDIA VRIPGWAKDA TVTVNGETIN GVKNGEYLTL SRQWREGDKI 
AIDLPMNTTF VEGHPRIEEI RNQVAVKRGP LVYCIETPDL PENTGILDAY IASDAQFDAQ 
FDQSFLGGMT TIKTQLLVRQ DNTQNMYDEV QKPTWGSHQA QFIPYYAWSN RGTAEMTVFV 
PVVWK