| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0900 |
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| Symbol | |
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| ID | 4172946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1071940 |
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| End bp | 1073496 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053901 |
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| Product | sugar transporter |
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| Protein accession | YP_660480 |
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| Protein GI | 109897225 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAACA GTGAAGTCGA CAGGAATGTC ACTAAGTTCG CGATCATCGC TGCTTTTGGC
GGCTTTGTAT TCGGTTTAGA TGCTGCCAAT ATTTCGGGTG CGCTGCGTTT TGTAAACTCG
CAATTCGAAC TCAGCAGCAT GCAAACGGGC ACCGTGGTTG GGGTGGCTAT TTTAGGCGTT
ATTTTAGCGC TTTTGTTCAC CGGGTCTTTT TGCGACAAAT TTGGTCGTCG TAAGGTCTTG
CTTGCCATTG CTCTTACGTA TTCTTTGTCT ACTTTGCTCT CTGCATTTGC CACGAGTTAC
ACCATGCTGG TGGTGGGGCG CTTCATTGGC GGAGTGGCGT TTGCCTCGAT TACCGTGTCG
GCCATGTATA TTGGTGAAAT TGCACCAGCG GACAAACGGG GCAAGTTTGT CTCTATCAAC
CAGCTATTAA TCACACTAGG TAGCTTGATG GCCTTCTTGG CTAACTATTG CCTTGTTTTA
TCTATGGACT CTATCGCGTG GATAGACAAC GAAAACGTAT GGCGCTTGAT GCTCGGTTTT
GAGCTAGTAC CAAACATCAT CTGGTTTCTG CTGCTATTAA CTGTGCCTCG CTCGCCTCGG
TGGTTGGTCG CTAAAGGTCA CTTGGAAGAA GCGCGCGAAG CGTTTGCAAA AATAGCCCCT
AAAGAGCAAA TAGAAAGCTT AATTGTTGCC GTGCAAGATA GCCTGAACAA AGAGTCGAAA
AACACACCGA TTACTCAGTT GAAAACACTT TTCAGTAAGC GCTTTACACT CGTACTATGT
GTGGCGTTTG GGTATGCCAT TGTGCAAGGG GCAAGTGGTA TGAACGCTGT GTTGTTCTAT
GCGCCTACGG TATTCGAGCA AATTGGTATG TCGGTAGAAG ACACCTTTAT GCAAACCGTT
ATTCTCGGTT TGGTAGCGGT TATTTTTACC TTAGTCGCCA TTCGTTTTGT AGAAAAATGG
GGGCGCCGGA ATTTGACCCT CATCGGGTTG CTATTCATCA GTATTGCTCA TACCTCTATC
TGGTACGGAT TTAAGTCCGC CCATTATGAG TTGAGCCAAG AGGCAATCGT AAAAATTCAG
CAAAGCGACA TTGACGTGAC ACTACTGCAA CCGCTAGTAG GTAAAACCTA CGCCACGGAC
GTTGATCTTA AGCGAGAGTT AACCGGCATT TATAGTAAAA AGGACTTACC CTTGGTCAGT
GGTGCGATTA TTAACTCGAC CATTAGCATC AATGCATTCT TTGTTCTGTT TGGACTTTTT
GCATTCTTAG CGGCATTTAA TATGTCGATA GGGCCTGTTA TGTGGGTGAT ATTTTCTGAA
ATCTTCCCGA ACAACGTGCG CAGCGTGGCC TTACCTGTTG CAGCGTTCGT GCAGAGTATT
TCAAGCTACG TAATACAGCA GTTTTTTCCT TGGCAGCTTG AGAATTTAGG TGCGGCGAAT
ACCTTCTTAA ACTACGGCAT TATCGCGTTT ATTGGCATGT TGGTTATGGC AAAAATACTG
CCGGAAACTA AGGGCAAAAG CATTGAAGAC ATCGAACGTG ATTTAGTAAA GGTGTGA
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| Protein sequence | MRNSEVDRNV TKFAIIAAFG GFVFGLDAAN ISGALRFVNS QFELSSMQTG TVVGVAILGV
ILALLFTGSF CDKFGRRKVL LAIALTYSLS TLLSAFATSY TMLVVGRFIG GVAFASITVS
AMYIGEIAPA DKRGKFVSIN QLLITLGSLM AFLANYCLVL SMDSIAWIDN ENVWRLMLGF
ELVPNIIWFL LLLTVPRSPR WLVAKGHLEE AREAFAKIAP KEQIESLIVA VQDSLNKESK
NTPITQLKTL FSKRFTLVLC VAFGYAIVQG ASGMNAVLFY APTVFEQIGM SVEDTFMQTV
ILGLVAVIFT LVAIRFVEKW GRRNLTLIGL LFISIAHTSI WYGFKSAHYE LSQEAIVKIQ
QSDIDVTLLQ PLVGKTYATD VDLKRELTGI YSKKDLPLVS GAIINSTISI NAFFVLFGLF
AFLAAFNMSI GPVMWVIFSE IFPNNVRSVA LPVAAFVQSI SSYVIQQFFP WQLENLGAAN
TFLNYGIIAF IGMLVMAKIL PETKGKSIED IERDLVKV
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