Gene Patl_0884 details

Gene Information

• Locus tag: Patl_0884
• ID: 4172013
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: -
• Start bp: 1043860
• End bp: 1044639
• Gene Length: 780 bp
• Protein Length: 259 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 638053885
• Product: hypothetical protein
• Protein accession: YP_660464
• Protein GI: 109897209

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.596872
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACACTCG TGAAGCTCAT ACTCATTGGT ACCTTACTCG GAATACTGTC TTCCTGCACT 
CATCAACGCC CCGTAAAAAG TGGCTGGCAT ACCCTATTCA ATGGGGAGAA TTTAGACGGC 
TGGACAGTAA AAATTCATCA TCATGAAGTG GGTGATAATG TGGACGATAC CTTTCGTGTT 
GAAAATGGTT TATTACGTGT CAGTTACGAT CAATACGATA CCTTTGACAA ACAGTTTGGC 
CATCTATACT TCAATCAACC CTTCAGCAAC TTTCACCTAA AGCTGGACTA TCACTTCTAC 
GGTGACTTCC TATCTGATGC CCCTCATTAC GCTGAGCGAA ACAGTGGTCT TATGTATTAC 
AGCCAAGCGC CTGATACGAT ACTGAAAGAA CAAGACTGGC CCATCTCGGT GGAAATGCAG 
TTTTTAGCTG GCCTAGATGA TGGTAAAGCA CGGCCAACAG GCAATATGTG CTCCCCAGGC 
ACGGACATCG AATACCAAGG CGCTGTTTAC ACCGATCACT GCTTGATGTC ATCATCACCA 
ACGATTCCGG TGGGTGAATG GGTTAGCGCA GAACTAATAG TCAATAATGG CAATGTGACC 
CACATCATTA ACGGTGACAT CGTATTGCAA TATACCCGCC CGACGATGGG AGGTAAGTTT 
GTAAAAGGGT ATGACCCTGC AATATGGACA CCGAGCGCAC CACTACACTC TGGATACATT 
GCTTTGCAAA GTGAAGGGCA TCCCATTGAG TTTAAAAATA TCAAAATTAA AGCATTGTAG 

 

Protein sequence

MTLVKLILIG TLLGILSSCT HQRPVKSGWH TLFNGENLDG WTVKIHHHEV GDNVDDTFRV 
ENGLLRVSYD QYDTFDKQFG HLYFNQPFSN FHLKLDYHFY GDFLSDAPHY AERNSGLMYY 
SQAPDTILKE QDWPISVEMQ FLAGLDDGKA RPTGNMCSPG TDIEYQGAVY TDHCLMSSSP 
TIPVGEWVSA ELIVNNGNVT HIINGDIVLQ YTRPTMGGKF VKGYDPAIWT PSAPLHSGYI 
ALQSEGHPIE FKNIKIKAL