| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0866 |
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| Symbol | |
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| ID | 4173715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1021929 |
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| End bp | 1022828 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638053869 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_660448 |
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| Protein GI | 109897193 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATTTA AAGGCCTAGA TTTGAACTTA CTCGTTGCGC TAGATGCACT CATAGCGGAG
CGCAATGTCA CACGAGCCGG TGAGCGAATA CATCTTAGCC AATCGGGAAT GAGTTCAGCG
GTTTCACGCT TAAGACAATA TTTTGATGAT GAATTATTTG TGCAAGTAGG CAGAGAACTC
ATCCCCACAT CGCTTACTGA AACGCTAGCT AAACCCGTTC GGCGAATTCT AGTAGAAATG
GAAAATACCA TAATAAGTAG ACCTAAATTT GACCCTGCCA GTGATGAACG GTGTTATAGA
ATCGCTGCGT CAGAATTAAC AACTATGGTA TTAATGCCCA CTGTGATTAG TCGGCTGGCC
CAGGACGCTC CTAATATTCG CTTGAATTTA TCGACCATTG GTGAAACCGA TTTGCTTGAT
AAAGGGGATA TTGACTTAAT GATTATTCCA AAACAGTTCA CGCAAGACGG ACACCCCTTC
GATGAGATAT ATCAAGAAGG TTACAAATGC ATTTGTTGGC AAGAAAACAC ATCGATTGGA
GAAAAAATAA CGTTTGAGGA TTATCAATCT GCTGGCCATG TTGTCGTCAG CTACGGTAAA
AATAACGCCC CAGCCTTTGA TAGTTGGTTT ATGAGTCATT ATGGTATTAG TCGAAGAGTA
GAAATTATGA CGTCTAATCT GCTAGCGCCG CCGTCCCTCA TTATCGGTAC GCAACGCATC
GCAACCGTAC ACAGTAGGCT GGCACAAATA GTTAGCCAAT CATTACCCAT CAGAGTGTTA
CAGCCCCCGA TTGAAATTCC CCCCTTGACG CAAAGTATGC AATATCATCG AAATCGAGAA
AATGATGTAG GATTAAGCTG GCTAAGACAA TTGATTATCG ATGTGGCAAA AACGATTTAA
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| Protein sequence | MRFKGLDLNL LVALDALIAE RNVTRAGERI HLSQSGMSSA VSRLRQYFDD ELFVQVGREL
IPTSLTETLA KPVRRILVEM ENTIISRPKF DPASDERCYR IAASELTTMV LMPTVISRLA
QDAPNIRLNL STIGETDLLD KGDIDLMIIP KQFTQDGHPF DEIYQEGYKC ICWQENTSIG
EKITFEDYQS AGHVVVSYGK NNAPAFDSWF MSHYGISRRV EIMTSNLLAP PSLIIGTQRI
ATVHSRLAQI VSQSLPIRVL QPPIEIPPLT QSMQYHRNRE NDVGLSWLRQ LIIDVAKTI
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