Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0844 |
Symbol | |
ID | 4173985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 995709 |
End bp | 996758 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638053847 |
Product | Rieske (2Fe-2S) region |
Protein accession | YP_660426 |
Protein GI | 109897171 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGTGC AAAAATATCC ATTAAATACT TGGTACGTTG CTTGTACACC AGATGAAATT ACGATGGCCC CCTTCGCTCG TAAAATATGC GGTATCGCCT TAGTGTTTTT CCGAAATACT CATGGAACGG TGGTTGCTCT AGAGGATTTT TGCCCTCATA GGGGGGCTCC TTTGTCCTTA GGAAAAGTCG AAAATGGTCA ATTAGTGTGT GGTTATCACG GCTTACGCAT GGGTGACGAT GGTGCTACTA AGGCAATGCC CAATCAACGT GTTCAGGCTT TTCCCTGTAT ACAACGTTAT GCAGTCGTTG AGCGCTATGG GTATATCTGG ATTTGGCCGG GCGATAAAAG TTTAGCCGAT GAATCCTTAC TGCCAAAGCT AGAATGGCCA AACAATCCAA ACTGGGGTTA TGGCGGTGGG CTATATCATA TCAAATGTGA TTATCGCTTG ATGATCGATA ACCTGATGGA CCTAACCCAT GAAACCTATG TACACGCCAG CAGCATAGGG CAGAAAGAAA TCGATGAAGC GCCCGTTACC ACGAAAGTTG ATGGTGAAAG TATTGTCACC AGCCGGTTTA TGGACAATGT AATGGCACCG CCTTTTTGGG CATCGGCCTT GCGCGCCAAT GATTTAGCCG ATGATATTCC TGTCGACCGT TGGCAAATCT GTCGCTTCAA CTTACCCAGC CATATTATGA TAGAAGTGGG GGTTGCTCAC GCAGGTAAGG GGGGTTACTT AGCGCCCAAA GAATGCAAAG CGAGCAGCAT AGTGGTTGAT TTCATCACAC CCGAATCTGA TCATTCCATT TGGTATTTTT GGGGGATGGC AAGAGACTTT AAACCCCAAG ATAGCGAGCT TACGAATTCA ATCCGCAGTG GACAAGGCGC CATCTTTGCC GAGGATTTAG ACGTATTAGA GCGACAACAA GAAAATCTAT TACGTCACCC CGATAGGACA CTTCTTAAAT TAGATATAGA TGCAGGTGGA GTACGCGCAC GCAGAATGAT TGAGCGCGCG ATTAAACAAG AGCAGGCTTC TGCGAATTAA
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Protein sequence | MSVQKYPLNT WYVACTPDEI TMAPFARKIC GIALVFFRNT HGTVVALEDF CPHRGAPLSL GKVENGQLVC GYHGLRMGDD GATKAMPNQR VQAFPCIQRY AVVERYGYIW IWPGDKSLAD ESLLPKLEWP NNPNWGYGGG LYHIKCDYRL MIDNLMDLTH ETYVHASSIG QKEIDEAPVT TKVDGESIVT SRFMDNVMAP PFWASALRAN DLADDIPVDR WQICRFNLPS HIMIEVGVAH AGKGGYLAPK ECKASSIVVD FITPESDHSI WYFWGMARDF KPQDSELTNS IRSGQGAIFA EDLDVLERQQ ENLLRHPDRT LLKLDIDAGG VRARRMIERA IKQEQASAN
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