| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0830 |
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| Symbol | |
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| ID | 4173971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 972733 |
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| End bp | 974640 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638053833 |
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| Product | sialic acid-specific 9-O-acetylesterase |
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| Protein accession | YP_660412 |
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| Protein GI | 109897157 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.174832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACAC AATTACGCTT ATCAATCTTT CTCGCTCTCT TTTGCACCCT ACTTACCCCA
ACAAGTCACG CTATTGAGCT GCCATCTATG TATGCTGAAC ATATGGTCAT TCAGCGCGAC
GCCCCTATCA AAATCAAGGG CAAAGCCGCC TCTGGCGCAA ACGTTACACT CACCATCGCG
GGGCAACAGC ACGATACCTC TGCCGATCGA CAAGGACATT GGCAAGTCAC CTTAACTGCC
GAATCGGCGG GTGGCCCCTT TATCCTGCGT GCCGCTGAGC CTGGCTCAAC AGTTGAAATA
AACGATGTGT ACTTTGGTGA CGTGTGGTTA GCCTCTGGCC AATCGAACAT GGAGTGGAAA
CTCGCTTGGC AAGTCGAGAA TTGGCAACAA GAAGTAAAAG ACAGTAACTT TCCATTGATC
CGTTATTTTG ACGTACCAAA CCATTATACT GCCGACGAGC AAAACAGCAT CAATCACGCT
CAGTGGCAAC TGGCGTCTCC GGCGACTTCC GGTAACTTTT CAGCGATCGC ATGGCTTTTT
GCTAAGCAAC TGCACCTTGA GAAAAACGTA CCGGTTGCCA TCATTGATGC AACGTGGGGC
GGCACGCCAG CAGAGGCGTG GACCCCACTA CCAACATTAC GCCAGCAAGA AGCCTATCAA
ACCCAAGCAA GTGAACTGAT GTCTGATCCC GCACATTGGA ATCAAATATT TCAGGATACT
CAAACCCAAG AACTGAAAAA GCAACAGCAT CTCGACAGCC AAGACGGCCA TCACGTTCAA
GGGTTAACGC ATCCTCGTTT TGATGACCAT CACTGGGTAA GCGCTGACCT GCCCTTACTC
AACCCTTTGC CGGATGTGCT ATGGGCGCGT AAACACTTTT CACTTACCCA TGCCCAACGT
CGGTCTGACG GCGCACTTTT TATTGGTTAT AGCCCTTCCC ATGTTCAAGT CTATTTAAAT
GGTAAGCAGG TACAAAAGTC ACCCGGGGCA CAAAGAGACG ACCCGTATAT TTTGCCTAAA
GAGCACTTTA ATGCTGGGGA TAATCTCATC GCTTTAAGAG CCGTAAACAG CTGGGATAAC
AAGGCCAATA TTGCCAGCAA GGACAAACTA ATACTGCACA TACAAGACGC TAAGATAGCG
CTCAATAATG ATTGGAAAAT CAATAATAAA GCAGAAGACC CGCTGCCCAT GCCACCTATG
TTGTGGCAAA AGCCAGGGGT GCTTTACAAC GCAATGATCC ATCCCTTGAT TGGCTTTCCA
TTGAAAGGGG TTATTTGGTA TCAAGGGGAA AGTAATGTAG GTCAAGCTGC GCAGTACGCG
TCGCTGTTTA CCTCTTTGAT GAAAAGCTGG CGGGAGCGTT GGGGTCAGAA AGAGTTACCT
TTTGTTTATG CACAACTGGC CAACATACAT GGAATAAAAG AGCAACCAGC TCCAAGCGAT
TGGGCGCTGT TACGAGAAGC TCAAACGCAA GCGTTAGCAC TCCCCCACAC CGCAATGGCG
GTATTAATGG ACGCTGGCGA CCCTTGGGAC ATTCACCCTA GAAACAAACA AATAGTCGCA
CAGCGCCTTT GGCACGGGGC AAAAAATGTC GCCTATCACG GTAAAAACCT TGCTTCTGGT
CCTATGATCG AAAAGATGCA GGTTGACGGC ACCAGTATTC TGCTGAGCTA TACAGACATA
GGCCAAGGCT TACGCGCGAA AGGACAGTCT CTACTCGGGT TCGAATTAGC AGGAAAAGAC
GGCCACTATG TGAATGCTCA AGCAAGTATT GAAGGCAATC AAGTGCGTTT ACACGCCGCG
GCTATAAAGG AGCCTGTATC TGTGCGCTAT GCTTGGGCTG ATAACTCTTT AGCTAACTTA
TATAACCTCG ACGGGTTTCC AGCTATTCCT TTTCGCATAG GGGAATAA
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| Protein sequence | MNTQLRLSIF LALFCTLLTP TSHAIELPSM YAEHMVIQRD APIKIKGKAA SGANVTLTIA
GQQHDTSADR QGHWQVTLTA ESAGGPFILR AAEPGSTVEI NDVYFGDVWL ASGQSNMEWK
LAWQVENWQQ EVKDSNFPLI RYFDVPNHYT ADEQNSINHA QWQLASPATS GNFSAIAWLF
AKQLHLEKNV PVAIIDATWG GTPAEAWTPL PTLRQQEAYQ TQASELMSDP AHWNQIFQDT
QTQELKKQQH LDSQDGHHVQ GLTHPRFDDH HWVSADLPLL NPLPDVLWAR KHFSLTHAQR
RSDGALFIGY SPSHVQVYLN GKQVQKSPGA QRDDPYILPK EHFNAGDNLI ALRAVNSWDN
KANIASKDKL ILHIQDAKIA LNNDWKINNK AEDPLPMPPM LWQKPGVLYN AMIHPLIGFP
LKGVIWYQGE SNVGQAAQYA SLFTSLMKSW RERWGQKELP FVYAQLANIH GIKEQPAPSD
WALLREAQTQ ALALPHTAMA VLMDAGDPWD IHPRNKQIVA QRLWHGAKNV AYHGKNLASG
PMIEKMQVDG TSILLSYTDI GQGLRAKGQS LLGFELAGKD GHYVNAQASI EGNQVRLHAA
AIKEPVSVRY AWADNSLANL YNLDGFPAIP FRIGE
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