| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0790 |
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| Symbol | |
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| ID | 4174124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 910274 |
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| End bp | 910672 |
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| Gene Length | 399 bp |
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| Protein Length | 132 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053792 |
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| Product | cytidine deaminase |
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| Protein accession | YP_660372 |
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| Protein GI | 109897117 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0295] Cytidine deaminase |
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| TIGRFAM ID | [TIGR01354] cytidine deaminase, homotetrameric |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000426322 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAATAAGC AACAAACTGA TTTACAAAGC CTCTTTAATG CCGCTTTGGA TGTACAAGCC
AAAGCACACG CTCCTTATTC TGATTACAGA GTGGGCTCTG CCCTAGTGGC AGAAGACGGT
AAAACGTATA CTGGCTGCAA CGTAGAAAAC GTGTCATTTC CGCTAGGTCA GTGTGCCGAA
GGAAACGCCT TAGCAGCAAT GGTGGCAGGT GGTGCGAGGC AAGTCCGTGA AATTTTAATT
GCCAGCCCAA ATGAACACTT TTGCTCACCG TGTGGCGGGT GTCGTCAGCG TATTTTTGAG
TTCGCCAGCA AAGACACTTT AGTTCATATG GCCACCAGCG AAGGTGAAAT TAAAACGCTT
TCCATGAATG AAATTTTACC CTTTGCATTT GAGCAGTAA
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| Protein sequence | MNKQQTDLQS LFNAALDVQA KAHAPYSDYR VGSALVAEDG KTYTGCNVEN VSFPLGQCAE
GNALAAMVAG GARQVREILI ASPNEHFCSP CGGCRQRIFE FASKDTLVHM ATSEGEIKTL
SMNEILPFAF EQ
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