| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0785 |
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| Symbol | |
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| ID | 4174119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 903211 |
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| End bp | 905700 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638053787 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_660367 |
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| Protein GI | 109897112 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.324932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACAC TTACACGTTC AATTAAATTC GCTTTGTTTG GTACTGCCCT CGCGGCTTTG
ACACCCGCCT ACGTGTTAGC TCAGCAAACC CAAGTTAATA TTTCAGTGCA ACCACTTGGG
CAAGCATTGA ACTTGTTATC GCAACAAACC GGCACGGTTA TTATTGCTCC AAGTCGCCTT
GTCAGCGGCA AACAGGCTAT TGCCATCTCA GGTGAACTTA GCGTTCTCAA TGCCGTAGAA
AAATTGTTAG ATGGCAGCGG CTTACAAGCG TACGAACAGC CCAGCGGCGC GATTGTTATC
AAAAAAGCGT CACAAAAAAA TAAATATCAA AATAAACGTG CCGCAAGCTA TCAAGCCCCG
ATGGACGAAG TTGTTGTGAC TGCGTTAAAG CGCGATAGCA GCTTACAAGA TACTCCTGTG
GCCATTTCAG TGTTGGGCGC AGACGAGTTA AAAGCCCAAG GCGTAACTGA CTTCACTGAC
TTAATTGATA GCCTCTCAGG CATTTCCATT AACTCTGCTT TTGGTGGCCC TGAAAACAGC
TTTATCACCA TACGTGGTAT AGGCGGCGCT GATGACTATA AGCCTAACGG TAACCCGTCC
GTAGCCTTAC ACGTTGATGG AATTTATCAA ACCTCCAACG CTTATTTGAG CATGCCTCTT
TTTGATTTAG AGCGCATCGA AGTACTCAAA GGACCCCAAG GCACCCTCTA CGGGCGCAAT
ACTACGGCCG GGGCAATTAA TGCTATCACT CGTGCCCCAG GTGAGGAGTT GAACGGCTAC
GCCGATATCG AATACGGCTC GTACGACTTT GTTTCAGGCA CAGCAGCGGT TGGCGGCAAG
GTCTCTGACA AGTTAGGCGT TCGCGTTGCG GTTCTTATGG AGCAAGGTGG AGGCTTTATG
GACGGTAAAG GTGCAGGCAA CTTCGCAGGC TTTGTACCCC AAGGCACCCA AGGTATTGTG
CCCCCAGTGG CTGACCCAGG TGAGCGCGAC GGATTTGGCG ATGCAGATTT ATTCGCCTTT
CGTGGCACAG CCGTATACGA CTTTGATGAG GTGACGTCTC TTACGCTGCA TTACTTTACC
AGCCAAGACC GAGGTGATAC CCGCCAGTAT GACCGTATTG CATTTGAAGA TGACAACCCT
TCACTTAACG CAGGGGAAGG TAACGACCCT TACGATTTTT ACACCAGCGA ATATTATTCT
CATGAAATCG ATGTGAGCGG ATTTTCAGGA GACCTTAACC GCCAATTACA ATCAGGCTTA
AACCTCGACA TACTATTTGC ATTGCAAAGC AGTGAGCGCA ATGTCAGTGG TAACGGAGAC
GGCACGTCAT TTCCTCGCTA CCAATACAAC TTCGACGATG ATCTTGACCA AACATCATTA
GAAATTCGCT TGAGTGACGC AACCGGCGGC GAATTTGACT GGATAGCAGG AGCCTTCTTT
ATGAATGACT CTGTTGATTT CACCAGTAAC TGGACCAGCT ACGCGGTGCT ATCTCAATAC
AGCTCGCCCT ACAATCAGCG CCGTAATAGC TTTGCGACCT TCGGAAACAT CGACTGGAAC
ATTTCAAACG ACTTAGTGAT AAGCGGTGGC CTGCGCTACA CCAAAGACAA TGCGAAATTC
CGCGGTGAAA ATATTGATGC CGATCCATGG GGATTATCAG TTTTCGAAGA AACCTTTAAA
ACAGACGCCA ACTTCTCATG GGACCGCGAG TTTGACGACA GCAATGTCTC AGGCAAACTG
GCTATTCAAT ATTTTATCAA TGACAATCTC AACGTTTTCG CCTCCGTGAG CACAGCCTAT
CGTGGTGGCG GTTTCGACGG CACATCGATA TTCTCTGAAG AAGAGACCCA GCCCTTCGAA
TCAGAAGAAG TACTCGCGTA TGAAGCAGGG GCACGGTATG TAACAGACAA CATCAACTTC
ACCTTTGACC TGTTCTCGTA TGATTTTGAA GAGCTGCAAG CAACGGCGCG GCTATCAAAC
GACACCAATG GTAGAACTAA CGTGGGTGAA GCCACCGTGC GCGGTGCAGA AGCCTCAATA
GCAGTCACGT TATATGAAGC CAATGATCAC AAAATCACCT TCAATACTGC CGGTACTTAT
TTGGATACGG AAATCACAGA ATTTAGCTCT AATCGGGTGA ACGATGTGGT CAGTACCATC
GGCGACCCAT TGCCTGGCTC TCCTGAATGG AGTCAAACGG CGGTACTAAA TTACCAAACA
TCACTGGCTA ACAATACCCA ACTCAACGCC CGTTTGAATT ACAGTTACCA CGGTGAAGAG
TCGAACCGCT TAAACGCTGG CGATGGCAAT ACAGCTCCCT CGTATGATTT GCTCGGTGTA
CGCCTAGATG TAACGTTTGC AAACGGGTTA AATGTTTACG CTTACGGTCG CAACATCACA
GATGAAGTGT ATTTTCTTGA GTTAAACGGT GGGGCGCGTT TAGTCGGCGC ACCGGCCACA
TACGGCGGTG GTGTTAGCTA CGCCTTTTAG
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| Protein sequence | MNTLTRSIKF ALFGTALAAL TPAYVLAQQT QVNISVQPLG QALNLLSQQT GTVIIAPSRL
VSGKQAIAIS GELSVLNAVE KLLDGSGLQA YEQPSGAIVI KKASQKNKYQ NKRAASYQAP
MDEVVVTALK RDSSLQDTPV AISVLGADEL KAQGVTDFTD LIDSLSGISI NSAFGGPENS
FITIRGIGGA DDYKPNGNPS VALHVDGIYQ TSNAYLSMPL FDLERIEVLK GPQGTLYGRN
TTAGAINAIT RAPGEELNGY ADIEYGSYDF VSGTAAVGGK VSDKLGVRVA VLMEQGGGFM
DGKGAGNFAG FVPQGTQGIV PPVADPGERD GFGDADLFAF RGTAVYDFDE VTSLTLHYFT
SQDRGDTRQY DRIAFEDDNP SLNAGEGNDP YDFYTSEYYS HEIDVSGFSG DLNRQLQSGL
NLDILFALQS SERNVSGNGD GTSFPRYQYN FDDDLDQTSL EIRLSDATGG EFDWIAGAFF
MNDSVDFTSN WTSYAVLSQY SSPYNQRRNS FATFGNIDWN ISNDLVISGG LRYTKDNAKF
RGENIDADPW GLSVFEETFK TDANFSWDRE FDDSNVSGKL AIQYFINDNL NVFASVSTAY
RGGGFDGTSI FSEEETQPFE SEEVLAYEAG ARYVTDNINF TFDLFSYDFE ELQATARLSN
DTNGRTNVGE ATVRGAEASI AVTLYEANDH KITFNTAGTY LDTEITEFSS NRVNDVVSTI
GDPLPGSPEW SQTAVLNYQT SLANNTQLNA RLNYSYHGEE SNRLNAGDGN TAPSYDLLGV
RLDVTFANGL NVYAYGRNIT DEVYFLELNG GARLVGAPAT YGGGVSYAF
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