Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0768 |
Symbol | |
ID | 4173946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 878245 |
End bp | 880236 |
Gene Length | 1992 bp |
Protein Length | 663 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638053770 |
Product | sulfotransferase |
Protein accession | YP_660350 |
Protein GI | 109897095 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTACCA AGCATACATC CCAAGCCAAA CCATCGTTTA ATGAAGCGTG TAACGGGATA AAACAACTTA TTCAACAGGC GAAATTTAGT CAGGCCATTG CGTTGTGTGA TCAGCAATTA GCGAGTCATT TATCAAATAA TAATAGAGTT GAAATACTGT ATTTATTGGT CGTAGCTCAG CGGTTAAATG GTGATTTAAG TGAGGCACTC GAGTCAAATA AAATCTTGCT GGAGGCAAAT GCTAAGCACG CACGAGCTTG GCAAGAAAAC GGTTATTTGT ATCTCGCATT GCGTGAGCCA CAACAGGCCG CTCAGTCTTT CTACCAAGCT ACGCAGTTAA ACCCCGCACT ACTGGCCAGC TGGCGCGCAT TACTGCCGCT TTATCAACAG CAAGAAAATG CCAAAGCGGT GACAATCAGC CAAGCACAAA TAGACTATTT ATCCGGGCTA CCTAATGCGG TGCTAGGTGC TAAAGATTTA ATGTACGAAG GGAATTTATA CGCAGCTGAC AAAGTTTGTC GTCAGTTCTT ACAAGCTAAC AAACACAACA GCGAGGCGAT GTTATTGCTC GCTGAAATCG GTATTCAGCT TAAAGTATAT GGCGAGGCTG AATTTATTTT AAGCAGTTGT TTAGCGCTTT ACCCTGAACA CAAAGCGGCC GGCATCGCGT ACCTTCAGCT GTTAGCCAAA ATGGCTAAAT TTGCCGAAGC AAAAGCCTTG GCTGATAAGC TGCTGGCAGC CTCTGGCGAT AACGTCGTCC TGTTAAGTGC TAAGGCCAGT GCTATGGTCG GGCTGGGGGA AGTGGAAGCA GCCATCTCAA TTTACCAAGA GTTGTTGCTA AGAAACCAAA ACCAGCCGGG CATACAACTA TTGTTGGGAC ATGCGTTAAA AGCGTTAGGG GATTTGCCAG GGGCAATCAA CGCTTACCAA CAGGCATATC GATACAAAGC TGAATTTGGT GACGCATACT GGAGTTTAGC CAACACCAAA ACCTATCGCT TTAGCGATAC TGAGCTTGCT GCAATGGAGC AACTTGTTGT TCAACAGAAT ATTGCGGTAG ATGACAGGGT ACATCTGCAT TTCGCCTTAG GTAAGTCATT GGAAGACAGG GGCTCTTTTG ATGCTGCATT TTCACATTAT GCCAAAGGTA ATCAGCTTAA ACAGCAACAG ATTAACTACA GTCCTGATGT GTTCGAGCGC CAAGTAGCCA AGCAAATCGA CACCTGCCAA CCAGAACTAT TTGCACGTTT AAAAGAAGCT GGCGAGCAAA GTCCTGATCC TATTTTCATT GTTGGTTTAC CCAGAGCGGG CTCGACGTTA CTCGAGCAGA TACTCGCATC GCACTCTCAA GTTGATGGCA CTATGGAGCT GCACGATATT CTTGGGCTGG CATCAAAATT ACAGGGTCAA AAAAATCAAT ATCCTCAGAT GTTGGCCGAT TTGGATGAAA GCTATTTTGC TCGTTTTGGG CAGAAGTATT TGCAAGACAC ACAAGTGTAC AGAGCCGGCG CGCCGTTTTT TATCGATAAA ATGCCGAACA ACTTTTTGCA CATAGGCCTA ATCAAATTAA TCTTGCCTAA CGCCAAAATA ATCGACGCAA GACGCGATCC TATGGCGTGC TGTTTTAGCG GCTTCAAGCA GTTATTTGGT GACGGGCAGG AGTTCTCATA CGGGCTAGAA GAGATAGGCC GTTATTACCG CGCTTATGAA CAACTTATGA CCCATTGGGA CACAGTGTTG CCAGGCTTCG TATTAACAGT GCAGCACGAA ACACTGATTG ATGACTTGCA TGGTCAAGTG GAGCGGATTT TGGATTTTTG CGGATTACCG TTTGAGCAAC AGTGTATCGA TTTTCATAAG ACTGAGCGGG CGATAAAAAC CCCCAGTTCA GAACAAGTCA GGCAGCCTAT ATACCGCTCA GGCATGGAGC AATGGAAGCA CTTCGATGCT CATTTAGGAC CGTTGAAAAA GGTCTTGAAC CATGACATGT AG
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Protein sequence | MSTKHTSQAK PSFNEACNGI KQLIQQAKFS QAIALCDQQL ASHLSNNNRV EILYLLVVAQ RLNGDLSEAL ESNKILLEAN AKHARAWQEN GYLYLALREP QQAAQSFYQA TQLNPALLAS WRALLPLYQQ QENAKAVTIS QAQIDYLSGL PNAVLGAKDL MYEGNLYAAD KVCRQFLQAN KHNSEAMLLL AEIGIQLKVY GEAEFILSSC LALYPEHKAA GIAYLQLLAK MAKFAEAKAL ADKLLAASGD NVVLLSAKAS AMVGLGEVEA AISIYQELLL RNQNQPGIQL LLGHALKALG DLPGAINAYQ QAYRYKAEFG DAYWSLANTK TYRFSDTELA AMEQLVVQQN IAVDDRVHLH FALGKSLEDR GSFDAAFSHY AKGNQLKQQQ INYSPDVFER QVAKQIDTCQ PELFARLKEA GEQSPDPIFI VGLPRAGSTL LEQILASHSQ VDGTMELHDI LGLASKLQGQ KNQYPQMLAD LDESYFARFG QKYLQDTQVY RAGAPFFIDK MPNNFLHIGL IKLILPNAKI IDARRDPMAC CFSGFKQLFG DGQEFSYGLE EIGRYYRAYE QLMTHWDTVL PGFVLTVQHE TLIDDLHGQV ERILDFCGLP FEQQCIDFHK TERAIKTPSS EQVRQPIYRS GMEQWKHFDA HLGPLKKVLN HDM
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