| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0694 |
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| Symbol | |
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| ID | 4172669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 791614 |
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| End bp | 792630 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053696 |
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| Product | PBSX family phage portal protein |
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| Protein accession | YP_660276 |
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| Protein GI | 109897021 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5518] Bacteriophage capsid portal protein |
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| TIGRFAM ID | [TIGR01540] phage portal protein, PBSX family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGCA AACCCACTAT TAAAATTCGC GCTGGTAGTA ACTTCAGCTT TGGCGACCCT
GAGCCCGTTT TAAACAACAA CCTGACGGAT TATTTAGGCA TTTTTACCCA CAATGGTGAG
TACTACACAC CGCCGGTGAG TTTAACGGGC TTGGTGAAGT GTTCGCGGGC GAACCCGCAT
CATGCCAGTG CATTGTATTT TAAGCGCAAC ATGGCCACTA AATGGTTTAT CCCTAGCCCG
TATTTAAGCC AAAAAAGCTT AAGCCGGGCA GCTTATGACT ACCACTGGGC GGGGCAATGT
TATTTCAGGG CTCGGTATAA TACATTTGGG CAGTTTTTGT ATTTCGAGCA TTTACCGGCG
TTATACATTC GCAAACTGGC GCCCAAAAAC GGGCAGTTTA ACCGCTATGG CATGTTAACC
AGTGGCGGTA AGTTAATGCC GTTTTTAAAT GATGAAGTGG TGCAGCTTAA AAACTATGAC
CCGACACAGG GCATTTATGG CACACCAGAA TATTTAGCCG GTTTACAAAG CATGTTGTTA
AATGAAGATG CGACCCTATT TAGACGCCGC TATTACAAGA ACGGTGCGCA CATGGGGTAT
GTATTTTTAA ATACATCGGG TGAAATGTCC GAAGAAGACG AAGATTTATT GTCAAAAGAA
ATTGGCTCGA GCAAAGGGGT GGGTAACTTT CGCTCGATGT TTTTAAGTTT GCCAGGTGCC
GATGCTGATT CAGTTAAAAT TTTACCTGTG GGTGACATTT CTACCAAAGA TGAATTCGAA
CGGGTGAAAA ACATTACGCG CAATGACGTA CTGGCCATGC ACCGCATTAA CCCGGCTTTG
TCTGGGGTAA TGCCAGATAA CGACGCGGGC TATGGTGACA TTGAAAAGAT AGGGCGGGTA
AATTATGAAA ATGAAGTGGT GCCCATTCAG CAAGTGTTTT TGCAGCTAAA CGATTATTTG
CCTGCGGGAA AAATGATTGC ATTTAAAGAG CCTGAAACGG CGATTGCTGC GGAATAG
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| Protein sequence | MSSKPTIKIR AGSNFSFGDP EPVLNNNLTD YLGIFTHNGE YYTPPVSLTG LVKCSRANPH
HASALYFKRN MATKWFIPSP YLSQKSLSRA AYDYHWAGQC YFRARYNTFG QFLYFEHLPA
LYIRKLAPKN GQFNRYGMLT SGGKLMPFLN DEVVQLKNYD PTQGIYGTPE YLAGLQSMLL
NEDATLFRRR YYKNGAHMGY VFLNTSGEMS EEDEDLLSKE IGSSKGVGNF RSMFLSLPGA
DADSVKILPV GDISTKDEFE RVKNITRNDV LAMHRINPAL SGVMPDNDAG YGDIEKIGRV
NYENEVVPIQ QVFLQLNDYL PAGKMIAFKE PETAIAAE
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