| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0636 |
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| Symbol | |
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| ID | 4173658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 735248 |
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| End bp | 736156 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053639 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_660219 |
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| Protein GI | 109896964 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGACA TTCACGCTCT TAAAAAACTC GATTTGAACT TGTTAAAAGT TTTTGAAAGT
TTGTATGTAG AACAGAATAT GACCCGTACC GCAGACGCTT TGCACATTAC GCCCTCTGCG
GTGAGCCACT CCATTAAGCG TTTACGCGAA TGTCTAGGAG ACCCGCTATT TCAGCGGAGT
AACAATCGTA TGCTGCCCAC GCCAGCCTGC CAACGAATGG CTCCGCTGAT CATCGATAAC
CTGACCCGAT TACGCCAAAT AATGCAGCAC TGGGGAGAGT TTCAGCCGTT AACCAGTGAG
CACCATTTTA GAATTGGTAT GCATTACGCG TTAGAGCCTA GCATCTTGCC AGCACTGACT
GAGCGACTCG CTTTGCTGGC ACCGAAAGTG ACGTTTTCTA GCGTCAGGGT CGATCGCATT
ACCTTAACGC GGGATCTGGG CGCTGGCCAT ATCGATTTAG CATTAGACGT TGCTTTGCCG
ATAAAGTCCC CTGTATTGCA CCAAAAACTG ATAGACGATG AATTTTGTGT CTTAGTGCGT
AAAGACCATC CCTTAAGAGA TCGCTTAACC AAGGACGCTT ACTTTAATGC CGAACACATA
GGGGTATCGA ATCGTTCAAG TGGCGCATCA GTTGAAGATT TACTCTTTCA ACAACAAGGC
TTGTCACGCA AAGTCGTGAT CCGCTGTCAG AACTATTTTT CTGCGAAGGG CATGGTCGCC
TGCTCTAATC ATTTACTGAC GGTACCGCGC AGAATTGCTG AGCATCTTAA GCAAGATGAT
GTGCAACTGG TCAGTTTGCC CGTCAACATA GCTGATATTT CCACGCACCT TTACTGGCAT
AAAAACACTG AGCAGGATTC TGCTCTCTCA TGGCTAAGAG CATTATTTGA CGGAATTTTT
ATAAATTAG
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| Protein sequence | MADIHALKKL DLNLLKVFES LYVEQNMTRT ADALHITPSA VSHSIKRLRE CLGDPLFQRS
NNRMLPTPAC QRMAPLIIDN LTRLRQIMQH WGEFQPLTSE HHFRIGMHYA LEPSILPALT
ERLALLAPKV TFSSVRVDRI TLTRDLGAGH IDLALDVALP IKSPVLHQKL IDDEFCVLVR
KDHPLRDRLT KDAYFNAEHI GVSNRSSGAS VEDLLFQQQG LSRKVVIRCQ NYFSAKGMVA
CSNHLLTVPR RIAEHLKQDD VQLVSLPVNI ADISTHLYWH KNTEQDSALS WLRALFDGIF
IN
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