| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0615 |
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| Symbol | |
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| ID | 4174103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 709635 |
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| End bp | 710612 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053618 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_660198 |
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| Protein GI | 109896943 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATACC AAAAGCGCTC CTTTGAAGAG CAGATTATCA TGTCAATTAG TGCCGCTGCA
GCGCTGTGTA TTCTCCCCTT TCTCGTTATT CGTATTATCA ACCAAGATTG GTACATTGCA
TTATTAGATT TTATAGCTGT TGCCTCAACG ACTGGACTGT TAGCTTATGT GTATTTTACT
CGGCGCACAC TATTTGCTAG ATGGGTGTTG TCTATTATCT GCCTTGCGAT CGCCTCGGGT
ACTATTTGGC TCAAAGGTGC GGAGCAAATT GTCTGGGTTT ACCCCGCTAT TATTTGCTTG
TTCTTTATTC TGCCCCCCCA ACTAGCAGCG GTTTTGTGTG CGGTAAACGT TGGCTTCATT
GGCTATTTGT TACACGCAGA TATGACCTTG CTAGACAATG TGCGCTATTA CTTTTCTACC
TTAGTGACCT TTTTCTTCAG CTATGCCTTT TCAGATCGTA TGCGTTTTCA GCAAGCCCAA
TTACAGATAT TGTCCTATAA GGACCCCCTT ACAGGAGCAG GCAACCGTAG AGCAATGGAA
GAGAAGCTAA TTGACATCGT TAAAGAACAA CGCCAGCAGC CCCAAAAGAT TAAAGCCTGT
TTGCTATTAA TCGACTTAGA CGAGTTTAAA AAAATAAATG ATCAATTGGG CCATGCATGC
GGTGATGGGG TGCTGGCACA GACATCAGCG CTGATAGAAC ATATGCTCAC CAGCGAACAG
CACTTGTACC GCTTCGGGGG CGAAGAGTTC GTCGTACTCA CTGACGGTAG CTTAGAGCAA
GCCATTACCC TTGGGGAAAG TATCCGTCAA GCCGTCAATG ACTTTCCGTT CGAACAAGGC
CTGCACATTA CTGTATCTAC CGGTATTGCT GAGTATCAGT TTGATGAGAC AGAGTTTGAA
TGGCTTGGCA GAGCAGATAC TGCTATGTAC CAAGCTAAAT CTGCAGGGCG GGATTTGTGT
TGTTTGGCTG CCTCCTAA
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| Protein sequence | MKYQKRSFEE QIIMSISAAA ALCILPFLVI RIINQDWYIA LLDFIAVAST TGLLAYVYFT
RRTLFARWVL SIICLAIASG TIWLKGAEQI VWVYPAIICL FFILPPQLAA VLCAVNVGFI
GYLLHADMTL LDNVRYYFST LVTFFFSYAF SDRMRFQQAQ LQILSYKDPL TGAGNRRAME
EKLIDIVKEQ RQQPQKIKAC LLLIDLDEFK KINDQLGHAC GDGVLAQTSA LIEHMLTSEQ
HLYRFGGEEF VVLTDGSLEQ AITLGESIRQ AVNDFPFEQG LHITVSTGIA EYQFDETEFE
WLGRADTAMY QAKSAGRDLC CLAAS
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