| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0585 |
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| Symbol | |
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| ID | 4173241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 670419 |
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| End bp | 671243 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638053587 |
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| Product | amino acid ABC transporter periplasmic protein |
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| Protein accession | YP_660168 |
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| Protein GI | 109896913 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACATTC GCCGGGCGCT CATCACTGCT TGGTTAGGAT TCATGTTGAT TCCTGCTCTT
TGCGGTAAAG CGCTCGCTCA AGAAAGTACG TCAGAACCTG CGTTTTGGGT TTTGACATCC
TTGGAGCCAC CTTTTAGCTT ACGTAACGAC AAGGGGCAGC TTGAAGGATA TTTGATTGAG
GTGGTTAGCG GTATTTTAGC CGAAGCAAAC ATTGAGCAAG AGATCCTCGC TGCGCCTTGG
GGGCGCTTAA TACAGGAAGC GCAAAGTAAA CCTAATGTGC TGATGTTTCC ACTGGCGCGC
ACCCCTGATA GAGAAAATGA CTATCACTGG ATTTTACCAC TGACTTCAAA TATTTACGGA
GTCCTTGGTG CTACTGAAGA TAAAAAGTTT GTAAAACGAA AAGAAGACTT GAATAAGGTA
TCGCCAATTG GCGTGCTCAA AAACGATTTT CGCCATAAAG TGCTGCTAGA TCAGAATATT
GAAGGTGTCA TGCCTTTTGA TGATTACGAC GCAGCCGTTT CTGAGCTCTT ATCGGGAAAG
CTTAGCTCTT TGTTTTTCTC TGACGCTGGC TTACGTTACT TTTGTTTTAA ACAAGGTGCG
GATTGCTCAC ACTTTACTTT GCTCTATGAA TACCAAACTC TCACCAGTTA TATTGCCTTG
TCAAAAGGTA CTGATGCCCA ACATATTGGT AAGTTAAAGA CAGCCGCAGC ACATTTCTTA
CGGGGTGCTA AATTTAAGGA AATACAACAA CGTTGGTTAA TGAAGCTACG CTCTCAAGGT
CCATTTAAAT TGCATATCGA TCATGGGGTG CTCAACCTCT GGTAG
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| Protein sequence | MHIRRALITA WLGFMLIPAL CGKALAQEST SEPAFWVLTS LEPPFSLRND KGQLEGYLIE
VVSGILAEAN IEQEILAAPW GRLIQEAQSK PNVLMFPLAR TPDRENDYHW ILPLTSNIYG
VLGATEDKKF VKRKEDLNKV SPIGVLKNDF RHKVLLDQNI EGVMPFDDYD AAVSELLSGK
LSSLFFSDAG LRYFCFKQGA DCSHFTLLYE YQTLTSYIAL SKGTDAQHIG KLKTAAAHFL
RGAKFKEIQQ RWLMKLRSQG PFKLHIDHGV LNLW
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