| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0479 |
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| Symbol | |
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| ID | 4171822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 552665 |
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| End bp | 554080 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053482 |
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| Product | peptidase S41 |
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| Protein accession | YP_660063 |
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| Protein GI | 109896808 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGGGGG AAGCTTTTAC CGATGCTGCT GGTGATGCTC TTGATGAAAA GCTTTGGCTG
CGCTCTTGGA CCAATAACAC TTACCTTTGG TATGACGAAG TCGACGACAA TAATCCGGCT
GATTTCTCAA CTTCAATATA CTTCGAGCAA CTGAAAACAG ATTTTCGGTC CGACGCGGGA
TCATTTAAAG ACAACTTTCA CTTTTCTCAA AGCACAGATG AGTATTTAAC CCGCACTCAA
CGAGGTCAGT CCTTTGGTTA CGGTATCAGT TGGGAGTTTA TTCAGGCGAG CGCGCCAAGA
CGCATTATTG TGCGCTACAC ACAACCTGGC TCTCCTGCAG AAAACGCTGG GATTGAACGT
GGTGATGAGT TGATTGCAAT AGACACTATC GATTTTATTA ACACTGAGAA TAATGATGAC
GTTGATACAA TCAACGAGGC GCTTTTTCCT TCAAGCGCAG GGCAAGTGTT TCAGTTTACC
TTGCAAAAGA AAAGTGGAGT TCAGCGCGAC TACTCATTAA CACCCAGTAA TGTTGAACTT
TCGCCCGTAC GAAACTCGAC GGTATTATCA ACAGAGATAG GTTCTGTCGG TTACGTTCAG
TTTGATAGCC ATATTCAGAG CGCACAGGGT CCTTTAATAT CCGCTTTCAA TCTATTTAGC
CAAAACAATG TGCAAGCCCT CATACTAGAC TTGCGCTATA ACGGCGGTGG CTTGCTGTCT
ATGGCCTCAC AATTGGCATT TATGGTCACA GGAGAACAGC AAACAGACGG CCTCATCTTT
GATGAACTTA AGTTCAATGA TAAGCATCCG ACTTTTGATC CAGTCACAGG CAGGCGACTT
CAACCAACCC CATTTTATAA CCGCGAAATA GATTATGAAC GGAATGAGTT TACGTCAAAT
GCCCTACCCA GCTTGGGCTT AAATACGATA TATATACTGA CCAGTGGTGC AACCTGTTCA
GCAAGCGAAG CGGTTATAAA CGGTTTAAGA GGCATCGATG TTGAGGTGGT GATAATTGGC
GATACAACAT GCGGCAAACC CTACGGCTTT TATCCTACAG ATAACTGTGG CACCACCTAC
TTCACAATAC AGTTTCAAGG CAGTAATCAA AAAGGCTTTG GCGAATATTC AGACGGCTTT
ATTCCTACCC CTAACCCCAT ATTTGAAGCT GATGTGCAAG GCTGCCTAGT GGAAGATGAC
TTTAGTCACG CATTAGGCTC TAATGATGAA CGCATGCTCA GCGCAGCGGT GAATCACTTA
CAAACTGGCC AATGCCCAGT ACAAGCTAAA GCGAAAATAG CCGTAGCCCA ATTTCCTGTC
AGTCAAGGTC CGAGCATTCA AACCTCTGTT AGTATTCTCG ATGCCATCAT GCTTGAAAAT
GCCCTTAACC AACCTATTGG TGAGCCACAA AAGTAA
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| Protein sequence | MTGEAFTDAA GDALDEKLWL RSWTNNTYLW YDEVDDNNPA DFSTSIYFEQ LKTDFRSDAG
SFKDNFHFSQ STDEYLTRTQ RGQSFGYGIS WEFIQASAPR RIIVRYTQPG SPAENAGIER
GDELIAIDTI DFINTENNDD VDTINEALFP SSAGQVFQFT LQKKSGVQRD YSLTPSNVEL
SPVRNSTVLS TEIGSVGYVQ FDSHIQSAQG PLISAFNLFS QNNVQALILD LRYNGGGLLS
MASQLAFMVT GEQQTDGLIF DELKFNDKHP TFDPVTGRRL QPTPFYNREI DYERNEFTSN
ALPSLGLNTI YILTSGATCS ASEAVINGLR GIDVEVVIIG DTTCGKPYGF YPTDNCGTTY
FTIQFQGSNQ KGFGEYSDGF IPTPNPIFEA DVQGCLVEDD FSHALGSNDE RMLSAAVNHL
QTGQCPVQAK AKIAVAQFPV SQGPSIQTSV SILDAIMLEN ALNQPIGEPQ K
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