Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0423 |
Symbol | |
ID | 4173812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 499547 |
End bp | 501946 |
Gene Length | 2400 bp |
Protein Length | 799 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638053426 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_660007 |
Protein GI | 109896752 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.721204 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATAAAC CGTTTGATGT GACACTGGAT AATTGTCATA AAGAGCCCAT CCATATCCCA GGTTCGATTC AACCTCATGG CTATCTATTA CTGTTTGAGC CAGAAACACT GATATTACAG TATTGCAGTG AAAACGTGGC GGACTTAATG CAATGCTCGC TAGACGCGTT ACTTGGGCAG TCATTGGATT CAATATTTGA CCGCGAATTC GCCACAAAGG TAAAGGCGCT CGATTTCGAT AAAGGCTTTC ACGAGGTTAA CCCACAGCAA ACGACACCGA TTGCCGCGCT CGCTCAAGCG CTGAACTCTA ATACCACGGG GCCGGTGACT GACGCGCAAG CCGAGAGTAT CAAAACACAA TCAACTTACA ATGCCATACT GAGCTTACAC GACGACCTAT TGGCCATTGA ATTAGAGCCC GCGTTATCTG CTAGTTCAAG TTCGTTTAAT CCCGTTAAAA ATTTAATTAA TCTATCGCTT AATGACTTGG CCCAAAGCCA AGACTTAAAT AACGTTTTTG CTTATTCAGT TAACGAAATT CGCAAAGTTA CTGGGTTTGA TCGCGTCATG TTGTATAAGT TTGATGCGGA CTATAACGGT GAAGTTGTTG CTGAGGCTAA AAAGCCTGAG TTGAACTCCT TTTTAAAACA GCACTTTCCT GAGTCAGATA TACCAAAGCA GGCGAGGGAG CTGTACGTTA AAAACCCCAT TAGACTGCTT GCTGATGTTA ACGCCAAGCA GTCTATGTTG TACCCAAATG ATCGGCCTGT TGACTTGAGT AAGGTGACGC TGCGCAGTGT GTCACCTATT CATTGTCAGT ATTTACGTAA CATGGGGGTG AATGCCTCTA TGTCGATCAG CATAGTGGTG TCGGGCAAGT TGTGGGGGCT AATTGCATGT CATCACTATC GCTCTCATGT AGTGCCGTTT GAAACGCGTG AAGTGGCTTT ATACATGGGG TTGATGTTGT CTTATTTGAT TTCATTAAAA GTACAAGCTG ATGCTGAGCA CCGTGATTCG GCGGTGTTAT CGTTAAATGC GTCGATCACC GCAAAAATGG CTGAGCGTAT TTTCTTTACA GATGGTTTGC GTGAAGAAAC AGACAATCTG ATGCGTATGA TGAACGCATC AGGCGTGGCC TGGCGACTAG AAGAAGACAT AGAATGCTTT GGCAAAACCC CCAGCCCTGA TCGCATAGAA GCGCTTTTTA ACTGGGCGAC ATCAACCAAG TTAGTCACAG ATACGATTTA CCATACAAAG ACCTTAGGTA AAGATAACCC TGACTTTATG GATATCAGTG ACGTTGCCAG TGGCGTATTC ATCTTGTCTG TCTCCTCTGT TAGTAACTTA TTCTTGATAT GGTTTAGGCA AGAGGTTGAA CAAACCAAAG ATTGGGGAGG GAAACCTGAA AAAACGATCG AGTTTTTAGA TGATGGCAGC CATAGGCTGA TGCCGCGAAG TTCTTTTCGT TTATGGCGTG AAAATGTCAA AAACCAATCG TTAGCCTGGG AAGCGGTAGA GTTATCCAGC GCTTTGAAAT TCCGAGACAC GATAGTGAAC TATGTGTTGT CAAAATCGGA GCGTCTTGAG TTACTAAACG AAGCGTTAGA GCACAAAGTA GCTGTGCGTA CCGACGAACT AAAAAAAGAA ATTGCTAATA AAGAAAAAAT GCAAGATGAG TTAGTGGAAG CCTTAGCCGC CTCTGAAGAA TCTAACCGTG AGCTAGAGCG TTTTGCATTT GTTGCCTCAC ACGACCTTCA AGAGCCGCTT CGTAAAATTC AGTCGTTTGG TGGGCGTATT CAGCAAACAG AGGCCACGTT AAGCGATAGA GGCCATGATT ATCTAACCAA GATGATGAAC TCAGCAGAAA GAATGCAGGC GCTGATTAAA GGCGTGCTGA GCTTTTCACG TATCCACAGA TCTAATGACG AGTTTGTTCC TTTGAATTTT GATGACATTA TTGAAGATGT GATCATGGAT TTAGAAGTGT TGGTGACAGA GCAAAAGGCA GCTTTCTCAA TCGATCATAT TGGCACAGTG TACGGAGATA AAAACCAGCT TCGCCGTGTG GCGCAAAATA TCATTCAGAA CGCCCTAAAA TTCACTAAAG AGGACGTCCC TCCGCACATT GTTATTGCCC TTAACGATAA AGACGAAGAC TTTGTCACCA TTGAATTTAA AGACAATGGC GTTGGATTTG CAAAAACGCA TGAGCAAAAA ATATTTGGTT TGTTTGAGCG TTTACACTCA AAAGCTGAGT ATTCAGGGAC TGGTCTAGGC TTAGCGATAT GCAAAAAAAT TATTAATCGA CATCAGGGGA AAATTTGGGC TGAGTCTCAA TTTGGTCAAG GCGCGTCATT TTTTATTACG TTGCCAATAA GATCAGAAGC AGTAGAATAA
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Protein sequence | MNKPFDVTLD NCHKEPIHIP GSIQPHGYLL LFEPETLILQ YCSENVADLM QCSLDALLGQ SLDSIFDREF ATKVKALDFD KGFHEVNPQQ TTPIAALAQA LNSNTTGPVT DAQAESIKTQ STYNAILSLH DDLLAIELEP ALSASSSSFN PVKNLINLSL NDLAQSQDLN NVFAYSVNEI RKVTGFDRVM LYKFDADYNG EVVAEAKKPE LNSFLKQHFP ESDIPKQARE LYVKNPIRLL ADVNAKQSML YPNDRPVDLS KVTLRSVSPI HCQYLRNMGV NASMSISIVV SGKLWGLIAC HHYRSHVVPF ETREVALYMG LMLSYLISLK VQADAEHRDS AVLSLNASIT AKMAERIFFT DGLREETDNL MRMMNASGVA WRLEEDIECF GKTPSPDRIE ALFNWATSTK LVTDTIYHTK TLGKDNPDFM DISDVASGVF ILSVSSVSNL FLIWFRQEVE QTKDWGGKPE KTIEFLDDGS HRLMPRSSFR LWRENVKNQS LAWEAVELSS ALKFRDTIVN YVLSKSERLE LLNEALEHKV AVRTDELKKE IANKEKMQDE LVEALAASEE SNRELERFAF VASHDLQEPL RKIQSFGGRI QQTEATLSDR GHDYLTKMMN SAERMQALIK GVLSFSRIHR SNDEFVPLNF DDIIEDVIMD LEVLVTEQKA AFSIDHIGTV YGDKNQLRRV AQNIIQNALK FTKEDVPPHI VIALNDKDED FVTIEFKDNG VGFAKTHEQK IFGLFERLHS KAEYSGTGLG LAICKKIINR HQGKIWAESQ FGQGASFFIT LPIRSEAVE
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