Gene Patl_0415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0415 
Symbol 
ID4173804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp488828 
End bp489574 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content46% 
IMG OID638053418 
Productoxidoreductase FAD/NAD(P)-binding 
Protein accessionYP_659999 
Protein GI109896744 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACAGT GGTTAGACGC AAAGGTCACA AAGCGGATTG ATTGGAACGA CCATCTTTTT 
AGCTTACGTT TTCAGTGCGC TGATTTTCCT GAATATACTC CAGGCCAATT TACTAAAGTC
GGCATCGCTC AAGATGACAC CGTCATTTCT AGGCCTTATT CTTTAGTCAG CCACCCACGT
AGCAGCGAAT TGGAAATTAT GGCTGTGCCG GTAGAGGAAG GCATTTTGTC ACCTAAATTA
CATGAATTAC GTGAAGGTGA TGGGCTAAAG GTTATGGCAC CAGCGACGGG CTTTTTGGTG
TTAAATGAAG TACCAGACAG CGACAATATT TGGCTGATTG CCACAGGCAC AGGAGTTGGG
CCTTTTCTAT CTATTCTTGC GGGCGAAGAG ATTTGGCAGC GGTATAAAAA AGTCGTTTTA
GTCTACGCGG CCCGGTATCA AAATGACTTG GCGTACGGCG AATTTATTCA ACAGTGTAAA
AGCCAACACT CAGTTCAATT TAGTTACCTA CCTATTGTCA GTCGAGAAGA AGGTAAAGGT
GCATTGCACG GGCGTATACC TGAATTATTG CAATCAGGAG CTATCATCAA CACAGCCAAT
ACGCCCTTAA GCGCCCAGCA AAGTCAGGTC ATGTTGTGCG GCAATCCACA AATGATCGAA
GAGGCTATGG CGACGCTAAA AAACATGGGG CTGAAGAAGC ATCTACGTCG CTCACCAGGT
CAGATTACGC AGGAGCGTTA CTGGTAG
 
Protein sequence
MAQWLDAKVT KRIDWNDHLF SLRFQCADFP EYTPGQFTKV GIAQDDTVIS RPYSLVSHPR 
SSELEIMAVP VEEGILSPKL HELREGDGLK VMAPATGFLV LNEVPDSDNI WLIATGTGVG
PFLSILAGEE IWQRYKKVVL VYAARYQNDL AYGEFIQQCK SQHSVQFSYL PIVSREEGKG
ALHGRIPELL QSGAIINTAN TPLSAQQSQV MLCGNPQMIE EAMATLKNMG LKKHLRRSPG
QITQERYW