| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0409 |
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| Symbol | |
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| ID | 4173798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 481967 |
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| End bp | 482434 |
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| Gene Length | 468 bp |
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| Protein Length | 155 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638053412 |
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| Product | AsnC family transcriptional regulator |
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| Protein accession | YP_659993 |
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| Protein GI | 109896738 |
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| COG category | [K] Transcription |
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| COG ID | [COG1522] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAC AAGTGTTAGA TAAAAGCAGT ATAAAAATCA TCAATGCCTT GGAAAAAGAT
GGTCGCATGT CATTCGCAAA CCTAGGTGAT ACCCTAGGTA TCAGTAAAAC ACCCTGTTGG
AATAAAGTGC AGCAATTGCA ATCGGCAGGG GTTATTGAAG GATATAGCGC CCAACTAAAT
ACCAAGGCGC TCGGCTTAAG CATTCGGGCA TTGGTACATG TGGTGGTCGA TTTTGAACAT
TATCAGGCGT TTGAAAAGGC GATTATCGAA CACGCTTCAG TGCGCTCTTG TCATGCTGTC
ACTGGAGATT CAGATTATGT GCTGGAGATA CTTGCGACTG ACATCGAGGC ATTTGACGAG
CTGTTAAGGG CACAGTTGAG CAGACTACCC GGCGTACAAC GCTTTAATAC TTCGATCTCC
ACGCGTATGG TCAAAAATAA TGGGCCATAT TCAAACATGT TGCCATAG
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| Protein sequence | MKKQVLDKSS IKIINALEKD GRMSFANLGD TLGISKTPCW NKVQQLQSAG VIEGYSAQLN
TKALGLSIRA LVHVVVDFEH YQAFEKAIIE HASVRSCHAV TGDSDYVLEI LATDIEAFDE
LLRAQLSRLP GVQRFNTSIS TRMVKNNGPY SNMLP
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