Gene Patl_0406 details

Gene Information

• Locus tag: Patl_0406
• ID: 4173795
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 479793
• End bp: 480335
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 638053409
• Product: hypothetical protein
• Protein accession: YP_659990
• Protein GI: 109896735

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.612402
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGGGTA AAGTAAGGTT TGTGGTCTTA GCCATAATAG GCAGTGTCAC TTGGGGGAAC 
GCATTTGCAG AAGGCTTTGC AGATGGCCCT GTTATTTTTG GTTACGGACA ACACGCGCCA 
GTAAAACAGG ACGTTACATT ACCAAAAGAC ACGGTATTTA AACTGACTTT TGATATTGAC 
CAAGCAGGCA AAGAGGGAGC ACTCAATCGC GGTATTGATA CGGTAGCGCG TTTCATCAAT 
ATGCATGTGG CGAACGGCGT GCCGCTGGAA AATCAACATC TCGCTATGGT GATCCATGGT 
AGTGCCAGCA ACGAAATGCT TAATACGAAG GCGTATAAGC AAAAATATGG CAAACCCAAT 
CCAAATGCTG AACTGCTCAG CACCTTGATA GCCAATGGTG TGCAAATCAT GCTGTGCGGG 
CAATCGGCTT ATTATCATCA GATTGCCAAC GATGACTTAA TCGATGGCGT TGATATGGTG 
CTATCCGCTA TGACCGCCCA TATGTTGTTG AATCAACAAG GGTATTACGT GAATCCTTTT 
TGA 

 

Protein sequence

MMGKVRFVVL AIIGSVTWGN AFAEGFADGP VIFGYGQHAP VKQDVTLPKD TVFKLTFDID 
QAGKEGALNR GIDTVARFIN MHVANGVPLE NQHLAMVIHG SASNEMLNTK AYKQKYGKPN 
PNAELLSTLI ANGVQIMLCG QSAYYHQIAN DDLIDGVDMV LSAMTAHMLL NQQGYYVNPF