Gene Patl_0390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0390 
Symbol 
ID4173480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp444971 
End bp445591 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content48% 
IMG OID638053388 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_659974 
Protein GI109896719 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAGACC CTATTTTAAA TAAACTGTTG AAAAAGCCTC TGTGCAGTGC GGCCAAACAA 
TTAATCAAAC GCGGAGCAAC CGCCGATTCG GTGACAGTAG CCGGCTTTGT TATTGGCATA 
CTTGCGGTGC CGGCCATTAT TTATGGTCAA TATGTATTGG CGTTGTGCTT GATCTTACTA 
AATCGCCTTG GCGACGGATT AGACGGCGCA ATCGCCAGAG AGACATCCCC TTCAGACGCA 
GGGGGCTTTT TGGATATCAC CTTAGATTTC ATATTCTACT CAGCCATTGT GTTCGCTTTT 
GTCTGCGCCA ACCCGGTGGA CAACGCCATA GCTGGCAGCT TTTTGATGCT GTCATTTATG 
GGCACAGGTG GCAGCTTTTT GGCCTTTGCC ATTATGGCCA GCAAACATGG CATCGACAGC 
CCTAACTACC CACAGAAAAG CTTGCACTAC ATGGGCGGTT TAGCAGAAGG CTTTGAAACC 
ATTCTAGTGC TGTGCTTATT TTGCTTATTC CCGAGTCAAT TTGTATTGAT AGCATCGGTA 
TTTGCGGCAA TCTGCTGGCT TACCGCGATC ATTCGAATTT GGGTGGGTTA TCACACCTTA 
GTGGCCACTA AAGACAGCTA G
 
Protein sequence
MLDPILNKLL KKPLCSAAKQ LIKRGATADS VTVAGFVIGI LAVPAIIYGQ YVLALCLILL 
NRLGDGLDGA IARETSPSDA GGFLDITLDF IFYSAIVFAF VCANPVDNAI AGSFLMLSFM 
GTGGSFLAFA IMASKHGIDS PNYPQKSLHY MGGLAEGFET ILVLCLFCLF PSQFVLIASV 
FAAICWLTAI IRIWVGYHTL VATKDS