Gene Patl_0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0388 
Symbol 
ID4173478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp443295 
End bp444002 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content44% 
IMG OID638053386 
Producthypothetical protein 
Protein accessionYP_659972 
Protein GI109896717 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.441494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACCT TGGTTAGCTT AGTTAGCTTC CTGGCTATTT TGCTTGTCGC CCTTCCTGGC 
CCCCTTTACA AATTTGGTAT ACTCGAGTTA GGCACTGCTT TTGCTGCATT ACGCTTCGGT 
GTATACGCCG GTATCGCTGC ATTAGTTTTG ATCCTAATCC AGATTATTTT TATGCGTAAA 
AATATTAGCT GGGCAGGTGT TGCTGTGTCA GCGGTGTTGG CATTAATCGC TGTAGGTTTA 
CCTATGAGCA TGATGAGTAA AGCGAAATCA GTCCCACCAA TTCATGATAT TTCTACAGAT 
TTGGTGAACC CACCTAAGTT TGTAGCAATT GTTGCTTTGC GTGCAGACGC GCCTAACCCG 
GTCGAGTATG CAGGTGAAGA AACTGCTAAA CAGCAGCGTG ACGCTTACCC AGAACTGACA 
ACGCAAAAAT ATAGCCAAAG CACCGAACAG TTGTTTGATG CAACACAAGC TGCGATCAAT 
GATTTGGGTT GGGAATTAGT CAACTCAGAC AAATCACTAG GGCTTGTTGA AGCAACAGAT 
ACCACTGGCT GGTTCGGTTT TAAAGATGAC GTTGTTGTAC GTATTCGTAC CACAGGCGAA 
GAAAGCTTCC TTGATGTACG CAGTAAATCC CGTGTAGGTA AAAGCGATTT GGGTAAAAAT 
GCTGAGCGTA TTCACTCGCT AATCGATGCT ATAAACAGCA AGCTTTAA
 
Protein sequence
MKTLVSLVSF LAILLVALPG PLYKFGILEL GTAFAALRFG VYAGIAALVL ILIQIIFMRK 
NISWAGVAVS AVLALIAVGL PMSMMSKAKS VPPIHDISTD LVNPPKFVAI VALRADAPNP 
VEYAGEETAK QQRDAYPELT TQKYSQSTEQ LFDATQAAIN DLGWELVNSD KSLGLVEATD 
TTGWFGFKDD VVVRIRTTGE ESFLDVRSKS RVGKSDLGKN AERIHSLIDA INSKL