| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0338 |
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| Symbol | |
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| ID | 4173161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 396334 |
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| End bp | 397353 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053337 |
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| Product | cyclic-AMP phosphodiesterase |
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| Protein accession | YP_659923 |
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| Protein GI | 109896668 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5212] Low-affinity cAMP phosphodiesterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACATA TTATTACAAA AGCGAAATGG CTACTGACCA TTTCGCTTTT TTTTGTAATC
AGTACAGGCC TGCAAGCCGA AACAGATCGC ACCTCTCCAG CGTTTGAACT TATCGTGCTA
GGCGACAGTG GCGGCATACA AGACGGAAAC TTGAGCGCCT TTTTGCTGCG CTCTGTCACC
GAGCCTAACT ATGTGGCATT AGATGCAGGC ACCTTGGTCA ATGGGATAAA TCAAAGCGTT
GAGCATGGCG CGTTCGACGA ATTGGCCATA GTGGATGATG ATAAGTGGGG TAAAGCGGGT
AGCATTTTGC GTCATCATGT TAAAGGTTAC TTAATAAGCC ATGCTCATCT CGATCACATC
AATGGCATGC TAGTGGCATC TCCAGAGGAC AGCAAAAAAA GCATTTACGC GATTCCCTCA
GTGAACACCA TGATCGGTGA AACCTACTTT AACGGCAAAG CTTGGGCTAA TTTTAGCGAC
CGAGGTATTC CTCCTATGCT AAGCAAATAC CAAGTAGTGG ACTTGCTACC AGGCAAAAAA
GCAGCAATCG CCGACACTGC GCTAAATGTC ACTGCTTTTA GCTTGAGCCA CCCAGTAGAG
TCCAGCGCGT TTGTGATTGA GCACGGGGAC GATATATTCG TTTACTTCGG TGACACCGGC
CCAGACATAG TGGAAAAACA AGGTAAGTTA GACGCCATCT GGACATATCT CGCTAAACAG
ATAAAGCACA AAAAGCTGCG AGGCATGATT ATCGAAACCT CGTTTGAAAA TGACCGCCCC
CATAACTTAT TGTTTGGCCA TTTAACGCCC GAGTTGCTGA TGAATGAGCT CGAGAGCTTC
GCCGCTAAAA TAGGTGGTGA AAAACCCCTT AAGGGTCTGA ATGTGGTGAT CAGCCATATC
AAATATACTT TGGCAAAAAA CGTCGACCCT AGGGCTAACA TCAAACAACA ACTGGATGAA
GCAAACAACT TAGGCCTTAA CATCATTATT CCACAGCAAG GTCAGAAGCT GCAGTTTTAG
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| Protein sequence | MRHIITKAKW LLTISLFFVI STGLQAETDR TSPAFELIVL GDSGGIQDGN LSAFLLRSVT
EPNYVALDAG TLVNGINQSV EHGAFDELAI VDDDKWGKAG SILRHHVKGY LISHAHLDHI
NGMLVASPED SKKSIYAIPS VNTMIGETYF NGKAWANFSD RGIPPMLSKY QVVDLLPGKK
AAIADTALNV TAFSLSHPVE SSAFVIEHGD DIFVYFGDTG PDIVEKQGKL DAIWTYLAKQ
IKHKKLRGMI IETSFENDRP HNLLFGHLTP ELLMNELESF AAKIGGEKPL KGLNVVISHI
KYTLAKNVDP RANIKQQLDE ANNLGLNIII PQQGQKLQF
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