| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0307 |
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| Symbol | |
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| ID | 4172901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 356009 |
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| End bp | 357241 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053306 |
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| Product | hypothetical protein |
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| Protein accession | YP_659893 |
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| Protein GI | 109896638 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.682528 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGATTT CTCTCGCTTG GAGCAGCTTA TGTAGCCGCA AAAAATCAGT CATTCTGACC
TTTCTATCTT TGTTGATTAG TATCAGCGTG CTGTTAAGCG TTGAGCATAT TCGCCAGCAA
GCTAAAACCA GTTTTAATCG CACCATTTCC GGGGCTGATC TTATCGTTGG CGCACCAAGC
GGCCAACTCA ACCTACTTCT ATATTCTGTA TTTCGTATGG GTGATCCCAC CAGCAACATA
GACTACCAAA GTTACGAAAT GCTCAAAAAC GATCAGCAGG TAGCGTGGGC CATTCCCATT
TCTTTAGGAG ATTCTCACCG CGGTTTTAGG GTGCTGGGCA CCAATGGTGA CTATTTCACG
CATTATCAGT TTGGTGATAA AAAATCGCTT GGGTTCACAG CAGGTAAGCC ATTTGCTGGT
ATGTTCGACA CCGTGATTGG CGCGGATGTC GCCAAAACGC TAGGTTACCA AGTGGGAGAT
AAAATCATTG TTGCCCATGG GATCGGCCAT ACCAGTTTTA GTCACCATGA TCATAGCCCG
TTTGTGATCA GTGGCATTTT AAAACCTACC GGCACGCCAG TTGATAAAAC CGTGCACGTA
ACTTTGCCCG CCATAGAAGC CATACATTTA CCCCCGTCTC AGTTAGCGAA AATTCTCGAT
GGCGAAGAAG CACAAAAGAT ACAGCCTGAT AGCGTCACTG CGGTGATATT GGGCTTAAAA
ACCAAGTTTG GCACCTTTAA CTTACAGCGA GATTTAAACA ATTACCAAGA TGACCGCTTG
ATGGCGGTTT TACCTGGAGT GGCACTCGCA GAGTTGTGGC AAATGATGGG AACCGTTGAG
AACGTACTTA GGGTCATTAG CGTGCTGGTG CTGCTGTCAT CTTTGTTTGG TTTGTCGACC
ATGTTGCTGG CATCCATGAA TGAGCGCAAA GGGGAAATAG CCGTGCTACG CACATTAGGC
GCAGGCCCGA GCGTTATTTT TGGCTTGGTG TTATTAGAAG CACTGATGCT GGTGGTCATC
GCCATTGCCA GTGCGGTATC GCTCGTCAGC GGATCTATCG CGCTGTTTAG CGATAAACTG
GCCGCCCATT ATGGCTTATT CTTAAGTGCT AACTTGCTAT CGTGGGAAAC CCTGCAAATC
GCCATGATTA TTACGCTAGC ATCCATTGTC ACCTCAGCCA TTCCCGCATT TGAAGCCTAT
AAAAAAGCGC TGCAATCGAG TCTATCTGGT TAA
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| Protein sequence | MLISLAWSSL CSRKKSVILT FLSLLISISV LLSVEHIRQQ AKTSFNRTIS GADLIVGAPS
GQLNLLLYSV FRMGDPTSNI DYQSYEMLKN DQQVAWAIPI SLGDSHRGFR VLGTNGDYFT
HYQFGDKKSL GFTAGKPFAG MFDTVIGADV AKTLGYQVGD KIIVAHGIGH TSFSHHDHSP
FVISGILKPT GTPVDKTVHV TLPAIEAIHL PPSQLAKILD GEEAQKIQPD SVTAVILGLK
TKFGTFNLQR DLNNYQDDRL MAVLPGVALA ELWQMMGTVE NVLRVISVLV LLSSLFGLST
MLLASMNERK GEIAVLRTLG AGPSVIFGLV LLEALMLVVI AIASAVSLVS GSIALFSDKL
AAHYGLFLSA NLLSWETLQI AMIITLASIV TSAIPAFEAY KKALQSSLSG
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