Gene Patl_0297 details

Gene Information

• Locus tag: Patl_0297
• ID: 4172930
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 348267
• End bp: 348746
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 638053296
• Product: ferric uptake regulator family protein
• Protein accession: YP_659883
• Protein GI: 109896628
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0735] Fe2+/Zn2+ uptake regulation proteins

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTGCTG TAGCGACAGA AGATTATTTC AAAATTGCTA AAGGGGTATG TGAGAAAGCG 
GGCAGTCGTT TGACTGACAC CCGCCAACAC ATGCTTGAAG TGCTAATTGA GGTTAATAAG 
CCATTGTCGG CCTATGAAAT AACTGAGCAA TACAACCAAA TCATTAAGCC TAAAATTATG 
ACGATGTCTG TTTATCGCAT ATTGGACTTT TTAGAGTCGG TACACTTAGT GCACCGACTG 
CAATCTATCA ACAAGTACGT TGTTTGCAAT CATTCATTGG GAGCCTGTCA TCATCATCCA 
CCTCTCTACA TGATTTGCAA ATCATGCCAG CACATCGAAG AAGTCGAGCT ACCAGATGAG 
GTGATAAGTA CCCTTACACA GCAGGCAAAA AGTGTTGGTT TTTCATCCGT CGGATCACAA 
GTGGAACTTT ATAGCGTGTG TGCAAAATGC AAATCGACGA GCAATCAAAA CCTATCGTGA 

 

Protein sequence

MGAVATEDYF KIAKGVCEKA GSRLTDTRQH MLEVLIEVNK PLSAYEITEQ YNQIIKPKIM 
TMSVYRILDF LESVHLVHRL QSINKYVVCN HSLGACHHHP PLYMICKSCQ HIEEVELPDE 
VISTLTQQAK SVGFSSVGSQ VELYSVCAKC KSTSNQNLS