Gene Patl_0296 details

Gene Information

• Locus tag: Patl_0296
• ID: 4172929
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 347587
• End bp: 348264
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 638053295
• Product: hypothetical protein
• Protein accession: YP_659882
• Protein GI: 109896627

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCAAAC GCATAACAAT GCTCACAGCC CTAATGAACT GTTGTTTTTC AACGACAGCC 
CAAGTGCATC AGCATGGTCA GGGACAGTTG TTTGTTTCAC AAGAAAACAG CGACTGGCAC 
GTGCAATTTA TTTTGCCTGC TGCCGATGTA CTTGGCTTCG AACATGCTCC TGAGAATGCA 
CAGCAAGAAA AGATCTTACA TTCACTCATT CAACGGCTAG ATAAAAATGA CGCTGTAGTC 
GATTTAGGTG AACACTGCAC ATTAAGTGAG GTAACGCACT CTTTGAGCGA GCATTCTTTA 
TCCGACGATC ACGAAAGTGG TGGCAACAAA GATTTGCATG AAGATAAGCG TTATAACGAT 
CACCATGCCC ACGAGGAACA TAGCTCCAGT GAAAACCACC ATGCTGACAA TCACGATGAA 
GACCTTTTAG CGGATGAAGA GCTTTCAGCG GGTAAAGGGC CTTCAGCGGG TAAAAAGCCC 
TCAGATCGGC TGAAACACGC AGAGCACCAA GATGTAGAGG TTGAATACCA CTTTGCTTGC 
GACACAAGTC ATAAAAAATT ATCCGTACCC CTGTTTCAGT GGTTGCCGTC CCTAGGTCGT 
ATTCAAGCCC AGTGGATAAC CGACGCTGGG CAGGGAACTG CCGTCTTAAA CCCAGAAAAC 
CCTAATTTGG AGTGGTGA 

 

Protein sequence

MIKRITMLTA LMNCCFSTTA QVHQHGQGQL FVSQENSDWH VQFILPAADV LGFEHAPENA 
QQEKILHSLI QRLDKNDAVV DLGEHCTLSE VTHSLSEHSL SDDHESGGNK DLHEDKRYND 
HHAHEEHSSS ENHHADNHDE DLLADEELSA GKGPSAGKKP SDRLKHAEHQ DVEVEYHFAC 
DTSHKKLSVP LFQWLPSLGR IQAQWITDAG QGTAVLNPEN PNLEW