| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0259 |
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| Symbol | |
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| ID | 4174006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 301976 |
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| End bp | 302893 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638053258 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_659845 |
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| Protein GI | 109896590 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTATAG ATTTTCCACC TGTTTTAGAG CACCTCTCGC TTTTCCTCAA CGCCCTGTTT
AGCAACAAGG TCGTGTTAAC TATCCTGCTC GCATTCTTCA TTTTAGGCGT GAAATACGCT
TTGGTGAAAA CTGTGCGCAA TCGCGCTATC AGCAAAGGTA AAGACAAGCG AGATTTGGTC
AACAATATCA AGAATTTTAT CAATTTTGTG ATGTTGTTTT TACTTCTCAG TTTGTGGGCA
GGAGAGTTAC AAAACTTCGC ACTTTCTATT GCGGCATTTG CGGTGGCTAT TGTTCTTGCT
ACTCGCGAGT TTATTCAATG TGTGATTGGT TTTTTCTATT TGGCCTCTAC CCGTCCTTTT
CGCATCGGGG ATTGGGTGCA AGTAGGGGAA ATCGTTGGTG AGGTATCTGA AACTGACTGG
ATGAAAAGTA CGCTATTAGA AGTAGACATT CATAAGTACG AATACACAGG TAAAACATTG
TTTATTCCTA ACAATGCGAT GATCACGAAC ACGATAAAAA ACCTAAATTT TTTAAAGCGT
TACGCGACGC ACCATTTTAA TATCACACGG GACCAGAGCG TTAATCCCTA TTTGTTTATT
GATCAGCTAC AGGCAAAAGC AGAGTTATAT TGTGCGGATT TTAAAGATGT TGCCTATCGG
TACAGTCAAA CGATTGAACG GCGCCTGGAT GTAAAAATTG CTGGCCCAGA TCCTCATATT
AACGTTTCCA CTTCGGATGT AGGCGATTCA GTTGTGACAG TCGCGATTTT TTGTCCAACG
GAACGTGCCA TAGAAATAGA ACAAAAACTG ATTAAAGATT TTATGACAAT GTGGTTTGCC
GCTAGGCGCA GCGGTAACGT TTTATCAATT CAGAATGAAC TTGATGAGAA AAATAATATC
GATGATAGTG CCCCCTAA
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| Protein sequence | MSIDFPPVLE HLSLFLNALF SNKVVLTILL AFFILGVKYA LVKTVRNRAI SKGKDKRDLV
NNIKNFINFV MLFLLLSLWA GELQNFALSI AAFAVAIVLA TREFIQCVIG FFYLASTRPF
RIGDWVQVGE IVGEVSETDW MKSTLLEVDI HKYEYTGKTL FIPNNAMITN TIKNLNFLKR
YATHHFNITR DQSVNPYLFI DQLQAKAELY CADFKDVAYR YSQTIERRLD VKIAGPDPHI
NVSTSDVGDS VVTVAIFCPT ERAIEIEQKL IKDFMTMWFA ARRSGNVLSI QNELDEKNNI
DDSAP
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