Gene Patl_0257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0257 
Symbol 
ID4174004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp300203 
End bp300925 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content43% 
IMG OID638053256 
Producthypothetical protein 
Protein accessionYP_659843 
Protein GI109896588 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAGG GACGTACGAT TGACACCAAG CAAACACGCT GGATAACTGG TTTCTTCCTG 
CTCATGTTTT CATTAGTTAT TGATATCGCC AGCGCCACAC AAGAAATACA GTTTAAGGTC 
GTTGATCAAA TGGGCAACCC TATTGCTAAT GCCGTTGTGA GTGCGAACGG AGAACCCACT 
GATGATATCG CTAACATTGC TGTGATGGAT CAAATCAATT CGCAGTTTTC TCCTCATGTT 
CTGGTTATTC AAAAAAATCA GGCGGTGCGC TTTCCGAACA GTGATGACAT TCGTCACCAT 
ATTTACAGCT TTTCTGAGCC TAAGCCTTTT GAGATACGAC TTTATAAGGG CGAACATTCA 
ACGCCTATTA CATTTGATAA GTCTGGCGTC GTGGTACTGG GCTGCAATAT TCACGACCAG 
ATGCTTGGCT ACATCTATGT AGCTGAAAAT GAAGTTACCG CCATCACAGA CCAAGATGGC 
ATTGCAAGGC TGCGCACACA AGCAACTGAG TTTACTTTTT GGCATGCTAA CTTGTCTGCC 
AGTAATTCAG AGCGTGTGAA GAAGTCATTC GCCCGAGAAA ATGCCCAGAA TAATGAAAGC 
ACTAATCGTA CAAGCAATAG AGTAAGTGAA ATGAAAACAG TGACCTTGAC TCTTTTAGAG 
AACAAAAAAA CAGAAGTGAA ACGCCGCAAG TTTTCGCGCA AATTTTCCTC TAGGGAGCAG 
TAA
 
Protein sequence
MNKGRTIDTK QTRWITGFFL LMFSLVIDIA SATQEIQFKV VDQMGNPIAN AVVSANGEPT 
DDIANIAVMD QINSQFSPHV LVIQKNQAVR FPNSDDIRHH IYSFSEPKPF EIRLYKGEHS 
TPITFDKSGV VVLGCNIHDQ MLGYIYVAEN EVTAITDQDG IARLRTQATE FTFWHANLSA 
SNSERVKKSF ARENAQNNES TNRTSNRVSE MKTVTLTLLE NKKTEVKRRK FSRKFSSREQ