Gene Patl_0221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0221 
Symbol 
ID4171767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp263790 
End bp264875 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content43% 
IMG OID638053220 
Producthypothetical protein 
Protein accessionYP_659807 
Protein GI109896552 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGACCA AAAAATCCAT TACTTATCTC GTATTGGCGA CCACAGCCAT ATTCATTGCA 
GTGCAAGGTT ACCGCGTGTG GTTGCTCAAT AGTGTTAAAT TCATCAGTTT TGATAGCCGC
TTAAAAGAAA TTTCCGGTAT TGAGTTCGAT AAAAGGCAGC GTTTGTGGGC AATCAATGAT
GGCGGAGATG AGCCGCGCTT GTATCAACTT GGCGATACAG GTGACATCGT CCGTAGCATC
AAAATCACTA ATGCCAAAAA TTCTGACTGG GAAGACATGA CCCAGGACTA TTTTGGCCAC
TTTTTTATTG GTGATTTTGG CAACAACCAC AATGATCGCG AATGGTTAAC CATCTACAAA
ATTGAAAATC CTATCGACAT AAAAGGAGAT ACCACCACTG CCGAAATCAT TAAGTTTACC
TACCCCAAAT TCAAGGCCAT AAAAGGTGAA AAACCGCGTA AAAATGTACA TTACGATGTT
GAAGCCTTTA TCTATTTTAA GCGCAATTTG TATCTGTTCA CCAAAAATCG TACGAGCCCT
TTTGACGGGA AAACACGCAT TTACAAAATT GGGGATCACG CAGCGAATTT TGACGCAGAA
TACATTAATG AATTTTCGAC CTGTACCATC ATAAAAGAAC TGTGCTGGGT GACGTCAGCT
GCGCTTAGCC CAGACCGCAC CAAACTGGTA TTGCTCGATT CAGAGCGTTT GTGGTTGTTC
GAAAATTGGA AAGGCGATGA CTTCTTTTCT GGCGACGCTT ATCAAATTGA TTTAGGCATA
GTCACGCAAA AGGAAGCCGT GACATTTGCT GCTGACAACA ATACCATTAT TTTCACTGAC
GAGGTCTTTA ATGGCATTGG TGGTAATGGT TACAGTATCC AATTGGACAA AGCGAAGAAA
ATTCCCGTTA GAAAACAAAT GAAGAAGTCA ATCAAAGTTA AACCCAAACT TAAGCCTGTA
GTGCCAACGC CTAAACTGGA CACCCCCGCG GTTCCTCCGT CGTCACCAGC GCAGTCTCCT
GAGGGAGCGC CTGCTAAATT AACCCCAACA ACAGAGCCTG AACCGGCAAT TCCCCGTCAA
TCGTAA
 
Protein sequence
MLTKKSITYL VLATTAIFIA VQGYRVWLLN SVKFISFDSR LKEISGIEFD KRQRLWAIND 
GGDEPRLYQL GDTGDIVRSI KITNAKNSDW EDMTQDYFGH FFIGDFGNNH NDREWLTIYK
IENPIDIKGD TTTAEIIKFT YPKFKAIKGE KPRKNVHYDV EAFIYFKRNL YLFTKNRTSP
FDGKTRIYKI GDHAANFDAE YINEFSTCTI IKELCWVTSA ALSPDRTKLV LLDSERLWLF
ENWKGDDFFS GDAYQIDLGI VTQKEAVTFA ADNNTIIFTD EVFNGIGGNG YSIQLDKAKK
IPVRKQMKKS IKVKPKLKPV VPTPKLDTPA VPPSSPAQSP EGAPAKLTPT TEPEPAIPRQ
S