Gene Patl_0219 details

Gene Information

• Locus tag: Patl_0219
• ID: 4171765
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: -
• Start bp: 262171
• End bp: 262890
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 638053218
• Product: hypothetical protein
• Protein accession: YP_659805
• Protein GI: 109896550

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAAATT TAATCAAACA TTATAAGAAA GCACTTCTAC TGGCGCTGCC CTTAGCATTG 
AGCGCCTGTG GCGACGACAC CAAAGAAGTG ATTGTTGAAG TTGAAGTCCC CGCACCGGTG 
CCTACGCCCG TTGACGTGAG CTACGATGTA ACGGTTATCA ACCTAACCAA CGGACAACCT 
GTATCACCTC CCGCGATTGT TCTTCACGCC GATGGCAATT TATGGGCAGT AGGTCAGGTA 
CCTTCTGTTG AGTTAGAGCG AATCGCAGAA GTCGGCGACT CTGAGTCATT CCTCACCCTA 
GGGATGACAA GTGCCGGTGG CGAAGGCCCA ATTATGCCTG GCGACCAGCA AACTATCAGT 
GTCACCATCC AAGACATCAC TGATGCTAAG TTGACTATCG CGGCAATGCT AGGCAATACC 
AATGATGCAT TTACCGGCTT AAATGCATGG GATTTGTCTC AATTGGAGGT AGGTGACAGC 
TGGACAAGCA ACCGCCCTGC ATATGATGCA GGCACTGAGA AAAACACCGA AAGTGCAGCA 
ACTGTGCCAG GCCCAGCTGC AAGCGGTGAA GGCTTTAACC CTACCCGTGA TGACACTGGC 
TTTATCTCCA TGCATCCAGG TGTGGTTAGT GTTGACGATG GCTTAAGTAC CTCAGCTTTA 
ACGGTTGAAC ACAAGTTCGA CAACCCTGTC ATTCGAGTGC GCATTACGCG AACGGAATAA 

 

Protein sequence

MPNLIKHYKK ALLLALPLAL SACGDDTKEV IVEVEVPAPV PTPVDVSYDV TVINLTNGQP 
VSPPAIVLHA DGNLWAVGQV PSVELERIAE VGDSESFLTL GMTSAGGEGP IMPGDQQTIS 
VTIQDITDAK LTIAAMLGNT NDAFTGLNAW DLSQLEVGDS WTSNRPAYDA GTEKNTESAA 
TVPGPAASGE GFNPTRDDTG FISMHPGVVS VDDGLSTSAL TVEHKFDNPV IRVRITRTE