| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0193 |
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| Symbol | |
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| ID | 4171739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 229894 |
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| End bp | 231219 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638053192 |
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| Product | peptidase U62, modulator of DNA gyrase |
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| Protein accession | YP_659779 |
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| Protein GI | 109896524 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.26115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCAGC AATTAACTGA TATCCAACAA ATAGTCGAAG ACGTACTTAA ACTGGCCAAG
GAAAAAGGCG CCACGCAAGC CGAAGCCAGC ATGTCAAAGG TGCGCGGTAT CGCGGTTTCC
TCTCGTTTAA AAGAAGTAGA AACAGTCGAG TTTACCAACG ATGGTGGTTT AGGGATCACG
GTATACAAGG GGCAACGCAA AGGCAGCGCC TCAACCGCAG ATTTGAGCCC GCAAGCGTTG
CGCTTAACGG TGGAAAAAGC CATCGAAATC GCTAAATACA CAGGGGAAGA CGCCTGCTCT
GGCTTGGCTG ACAAAGAATT GATGGCATTT GAGCCGCAAG ACCTTGACCT GTTTCATCCT
ATCGAGCTAG ATACTGACTT TGCCATAGAG CAAGTCATTA AAGCGGAAAC CGCTGCATTA
GCATTCGACC CGCGCATTAC CAACTCTGAT GGCGCGTCTT ACAATGCGAA TCTGGGCACC
AAGGTATACG GTAACAGCCA CGGTTTAAAT GTGGGTTACA ACAGCAGTCG CTACAGCATG
AGCTGTGTGG TCATTGGTGA ACAAGATGGC GATATGCAGC GTGATTACAG CTATACCGTT
GAGCGCCAAG CAAACCTTAT GGCAAGCCCT GAGCAAATAG GCAAAGAGTC GGCTGAGTTT
ACCTTAGGCC GCTTAGGCGC TCGTCAAATC AAAACAGCCA AAGTTCCCGT GTTGTTTGAC
AAAGAAATTG CCTCTGGTTT GATTGGGCAT TTCATCAGTG CAATCAGCGG TGGCAATTTA
TACCGTAAAT CGTCATTTTT AGTGGATAAA CTCGGTGAGC AAGTGCTGCC TAGCTGGTTT
AGCATCAGCG AACGCCCTTT TATCATGCGT GGTTTAGCCA GTTCAGCGTT TGATCATGAA
GGTGTGCGTA CTAAAGACAG TGAGATCGTC ACTGACGGTA TCCTTAATCA ATACCTGTTA
ACCAGTTACT CTGCCCGTAA GATGAAAATG CAAACCACTG GCCATGCTGG CGGTATTCAC
AACTGGCTCA TTAAGCCTAC GGGGCAAAGC GATAAGCAAA TGTTAGCTGA GCTTGGTACG
GGGTTGTTAG TCACTGAATT GATGGGCCAA GGAGTGAACG TGGTCACGGG CGATTATAGC
CGCGGTGCGG CGGGATTCTG GGTCGAGAAT GGTGTGATTC AATATCCAGT GCACGAAATC
ACCATCGCGG GGAATCTGGC CGATATGTTG AAAAATATCG TTGCTGTGGG TTCAGAAATA
GAACGCCGCG GCAGCATTCA AACTGGCTCT ATCTTAATTG ATAACATGCA GGTCGCTGGC
GATTAG
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| Protein sequence | MQQQLTDIQQ IVEDVLKLAK EKGATQAEAS MSKVRGIAVS SRLKEVETVE FTNDGGLGIT
VYKGQRKGSA STADLSPQAL RLTVEKAIEI AKYTGEDACS GLADKELMAF EPQDLDLFHP
IELDTDFAIE QVIKAETAAL AFDPRITNSD GASYNANLGT KVYGNSHGLN VGYNSSRYSM
SCVVIGEQDG DMQRDYSYTV ERQANLMASP EQIGKESAEF TLGRLGARQI KTAKVPVLFD
KEIASGLIGH FISAISGGNL YRKSSFLVDK LGEQVLPSWF SISERPFIMR GLASSAFDHE
GVRTKDSEIV TDGILNQYLL TSYSARKMKM QTTGHAGGIH NWLIKPTGQS DKQMLAELGT
GLLVTELMGQ GVNVVTGDYS RGAAGFWVEN GVIQYPVHEI TIAGNLADML KNIVAVGSEI
ERRGSIQTGS ILIDNMQVAG D
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